KEGG   PATHWAY: cpel03430
Entry
cpel03430                   Pathway                                
Name
Mismatch repair - Campylobacter peloridis
Description
DNA mismatch repair (MMR) is a highly conserved biological pathway that plays a key role in maintaining genomic stability. MMR corrects DNA mismatches generated during DNA replication, thereby preventing mutations from becoming permanent in dividing cells. MMR also suppresses homologous recombination and was recently shown to play a role in DNA damage signaling. Defects in MMR are associated with genome-wide instability, predisposition to certain types of cancer including HNPCC, resistance to certain chemotherapeutic agents, and abnormalities in meiosis and sterility in mammalian systems.
The Escherichia coli MMR pathway has been extensively studied and is well characterized. In E. coli, the mismatch-activated MutS-MutL-ATP complex licenses MutH to incise the nearest unmethylated GATC sequence. UvrD and an exonuclease generate a gap. This gap is filled by pol III and DNA ligase. The GATC sites are then methylated by Dam. Several human MMR proteins have been identified based on their homology to E. coli MMR proteins. These include human homologs of MutS and MutL. Although E. coli MutS and MutL proteins are homodimers, human MutS and MutL homologs are heterodimers. The role of hemimethylated dGATC sites as a signal for strand discrimination is not conserved from E. coli to human. Human MMR is presumed to be nick-directed in vivo, and is thought to discriminate daughter and template strands using a strand-specific nick.
Class
Genetic Information Processing; Replication and repair
Pathway map
cpel03430  Mismatch repair
cpel03430

Other DBs
GO: 0006298
Organism
Campylobacter peloridis [GN:cpel]
Gene
CPEL_1263  mutS2; DNA mismatch binding protein, MutS2 family [KO:K07456]
CPEL_1160  UvrD/REP family helicase [KO:K03657] [EC:5.6.2.4]
CPEL_0854  rep; ATP-dependent DNA helicase [KO:K03657] [EC:5.6.2.4]
CPEL_1454  xseA; exodeoxyribonuclease VII, large subunit [KO:K03601] [EC:3.1.11.6]
CPEL_1268  xseB; exodeoxyribonuclease VII, small subunit [KO:K03602] [EC:3.1.11.6]
CPEL_0012  recJ; single-stranded DNA-specific exonuclease [KO:K07462] [EC:3.1.-.-]
CPEL_1054  ssb; single-strand DNA binding protein [KO:K03111]
CPEL_a22  single-stranded DNA-binding protein [KO:K03111]
CPEL_0993  dnaE; DNA polymerase III, alpha subunit [KO:K02337] [EC:2.7.7.7]
CPEL_0002  dnaN; DNA polymerase III, beta subunit [KO:K02338] [EC:2.7.7.7]
CPEL_0572  dnaX; DNA polymerase III, gamma and tau subunits [KO:K02343] [EC:2.7.7.7]
CPEL_1052  holA; DNA polymerase III, delta subunit [KO:K02340] [EC:2.7.7.7]
CPEL_0739  holB; DNA polymerase III, delta prime subunit [KO:K02341] [EC:2.7.7.7]
CPEL_1131  dnaQ; DNA polymerase III, epsilon subunit [KO:K02342] [EC:2.7.7.7]
CPEL_0741  ligA; DNA ligase, NAD-dependent [KO:K01972] [EC:6.5.1.2]
Reference
  Authors
Jiricny J.
  Title
The multifaceted mismatch-repair system.
  Journal
Nat Rev Mol Cell Biol 7:335-46 (2006)
DOI:10.1038/nrm1907
Reference
  Authors
Li GM.
  Title
Mechanisms and functions of DNA mismatch repair.
  Journal
Cell Res 18:85-98 (2008)
DOI:10.1038/cr.2007.115
Reference
  Authors
Marti TM, Kunz C, Fleck O.
  Title
DNA mismatch repair and mutation avoidance pathways.
  Journal
J Cell Physiol 191:28-41 (2002)
DOI:10.1002/jcp.10077
Reference
  Authors
Ikejima M, Shimada T.
  Title
[Molecular mechanism of mismatch repair]
  Journal
Tanpakushitsu Kakusan Koso 46:1124-9 (2001)
KO pathway
ko03430   
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