KEGG   PATHWAY: cre03030
Entry
cre03030                    Pathway                                
Name
DNA replication - Chlamydomonas reinhardtii
Description
A complex network of interacting proteins and enzymes is required for DNA replication. Generally, DNA replication follows a multistep enzymatic pathway. At the DNA replication fork, a DNA helicase (DnaB or MCM complex) precedes the DNA synthetic machinery and unwinds the duplex parental DNA in cooperation with the SSB or RPA. On the leading strand, replication occurs continuously in a 5 to 3 direction, whereas on the lagging strand, DNA replication occurs discontinuously by synthesis and joining of short Okazaki fragments. In prokaryotes, the leading strand replication apparatus consists of a DNA polymerase (pol III core), a sliding clamp (beta), and a clamp loader (gamma delta complex). The DNA primase (DnaG) is needed to form RNA primers. Normally, during replication of the lagging-strand DNA template, an RNA primer is removed either by an RNase H or by the 5 to 3 exonuclease activity of DNA pol I, and the DNA ligase joins the Okazaki fragments. In eukaryotes, three DNA polymerases (alpha, delta, and epsilon) have been identified. DNA primase forms a permanent complex with DNA polymerase alpha. PCNA and RFC function as a clamp and a clamp loader. FEN 1 and RNase H1 remove the RNA from the Okazaki fragments and DNA ligase I joins the DNA.
Class
Genetic Information Processing; Replication and repair
Pathway map
cre03030  DNA replication
cre03030

Organism
Chlamydomonas reinhardtii [GN:cre]
Gene
CHLRE_13g561900v5  uncharacterized protein [KO:K03470] [EC:3.1.26.4]
CHLRE_17g718850v5  uncharacterized protein [KO:K07466]
CHLRE_16g651000v5  uncharacterized protein [KO:K07466]
CHLRE_12g515850v5  uncharacterized protein [KO:K04802]
CHLRE_03g145687v5  uncharacterized protein [KO:K04799] [EC:3.1.-.-]
CHLRE_07g325716v5  uncharacterized protein [KO:K10747] [EC:6.5.1.1 6.5.1.6 6.5.1.7]
CHLRE_04g214350v5  uncharacterized protein [KO:K02320] [EC:2.7.7.7]
CHLRE_01g017450v5  uncharacterized protein [KO:K02321]
CHLRE_07g312350v5  uncharacterized protein [KO:K02684] [EC:2.7.7.102]
CHLRE_01g015250v5  uncharacterized protein [KO:K02327] [EC:2.7.7.7]
CHLRE_08g374050v5  uncharacterized protein [KO:K02328]
CHLRE_06g292950v5  uncharacterized protein [KO:K03505]
CHLRE_03g179961v5  uncharacterized protein [KO:K02324] [EC:2.7.7.7]
CHLRE_10g424200v5  uncharacterized protein [KO:K02325] [EC:2.7.7.7]
CHLRE_07g341800v5  uncharacterized protein [KO:K02326] [EC:2.7.7.7]
CHLRE_07g338000v5  uncharacterized protein [KO:K02540] [EC:5.6.2.3]
CHLRE_06g295700v5  uncharacterized protein [KO:K02541] [EC:5.6.2.3]
CHLRE_07g316850v5  uncharacterized protein [KO:K02212] [EC:5.6.2.3]
CHLRE_01g023150v5  uncharacterized protein [KO:K02209] [EC:5.6.2.3]
CHLRE_03g178650v5  uncharacterized protein [KO:K02542] [EC:5.6.2.3]
CHLRE_10g455850v5  uncharacterized protein [KO:K02210] [EC:5.6.2.3]
CHLRE_02g100000v5  uncharacterized protein [KO:K10739]
CHLRE_12g521200v5  uncharacterized protein [KO:K10754]
CHLRE_07g337150v5  uncharacterized protein [KO:K10755]
CHLRE_06g251800v5  uncharacterized protein [KO:K10755]
CHLRE_16g679950v5  uncharacterized protein [KO:K10756]
CHLRE_12g527300v5  uncharacterized protein [KO:K10756]
CHLRE_17g701350v5  uncharacterized protein [KO:K10743] [EC:3.1.26.4]
CHLRE_07g320800v5  uncharacterized protein [KO:K10744]
CHLRE_08g378100v5  uncharacterized protein [KO:K10745]
Reference
PMID:8087839
  Authors
Stillman B.
  Title
Smart machines at the DNA replication fork.
  Journal
Cell 78:725-8 (1994)
DOI:10.1016/S0092-8674(94)90362-X
Reference
PMID:9759502
  Authors
Waga S, Stillman B.
  Title
The DNA replication fork in eukaryotic cells.
  Journal
Annu Rev Biochem 67:721-51 (1998)
DOI:10.1146/annurev.biochem.67.1.721
KO pathway
ko03030   
LinkDB

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