KEGG   PATHWAY: ctt00970
Entry
ctt00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Comamonas thiooxydans
Class
Genetic Information Processing; Translation
Pathway map
ctt00970  Aminoacyl-tRNA biosynthesis
ctt00970

Organism
Comamonas thiooxydans [GN:ctt]
Gene
CtCNB1_R0038  tRNA-Ala [KO:K14218]
CtCNB1_R0041  tRNA-Ala [KO:K14218]
CtCNB1_R0011  tRNA-Ala [KO:K14218]
CtCNB1_R0086  tRNA-Ala [KO:K14218]
CtCNB1_R0027  tRNA-Ala [KO:K14218]
CtCNB1_R0002  tRNA-Arg [KO:K14219]
CtCNB1_R0078  tRNA-Arg [KO:K14219]
CtCNB1_R0075  pseudogene [KO:K14219]
CtCNB1_R0018  tRNA-Arg [KO:K14219]
CtCNB1_R0074  tRNA-Arg [KO:K14219]
CtCNB1_R0076  tRNA-Arg [KO:K14219]
CtCNB1_R0046  tRNA-Arg [KO:K14219]
CtCNB1_R0064  pseudogene [KO:K14220]
CtCNB1_R0065  tRNA-Asn [KO:K14220]
CtCNB1_R0066  tRNA-Asn [KO:K14220]
CtCNB1_R0067  tRNA-Asn [KO:K14220]
CtCNB1_R0068  tRNA-Asn [KO:K14220]
CtCNB1_R0040  tRNA-Asp [KO:K14221]
CtCNB1_R0043  tRNA-Asp [KO:K14221]
CtCNB1_R0035  tRNA-Cys [KO:K14222]
CtCNB1_R0060  tRNA-Gln [KO:K14223]
CtCNB1_R0073  tRNA-Gln [KO:K14223]
CtCNB1_R0016  tRNA-Gln [KO:K14223]
CtCNB1_R0039  tRNA-Glu [KO:K14224]
CtCNB1_R0042  tRNA-Glu [KO:K14224]
CtCNB1_R0004  tRNA-Gly [KO:K14225]
CtCNB1_R0031  tRNA-Gly [KO:K14225]
CtCNB1_R0033  tRNA-Gly [KO:K14225]
CtCNB1_R0032  tRNA-Gly [KO:K14225]
CtCNB1_R0036  tRNA-Gly [KO:K14225]
CtCNB1_R0034  tRNA-Gly [KO:K14225]
CtCNB1_R0058  tRNA-Gly [KO:K14225]
CtCNB1_R0051  tRNA-His [KO:K14226]
CtCNB1_R0052  tRNA-His [KO:K14226]
CtCNB1_R0010  tRNA-Ile [KO:K14227]
CtCNB1_R0026  tRNA-Ile [KO:K14227]
CtCNB1_R0087  tRNA-Ile [KO:K14227]
CtCNB1_R0071  tRNA-Leu [KO:K14228]
CtCNB1_R0037  tRNA-Leu [KO:K14228]
CtCNB1_R0023  tRNA-Leu [KO:K14228]
CtCNB1_R0069  tRNA-Leu [KO:K14228]
CtCNB1_R0070  tRNA-Leu [KO:K14228]
CtCNB1_R0030  tRNA-Leu [KO:K14228]
CtCNB1_R0020  tRNA-Lys [KO:K14229]
CtCNB1_R0021  tRNA-Lys [KO:K14229]
CtCNB1_R0022  tRNA-Lys [KO:K14229]
CtCNB1_R0019  tRNA-Lys [KO:K14229]
CtCNB1_R0049  tRNA-Lys [KO:K14229]
CtCNB1_R0017  tRNA-Met [KO:K14230]
CtCNB1_R0079  tRNA-Met [KO:K14230]
CtCNB1_R0080  tRNA-Met [KO:K14230]
CtCNB1_R0001  tRNA-Met [KO:K14230]
CtCNB1_R0053  tRNA-Met [KO:K14230]
CtCNB1_R0083  tRNA-Met [KO:K14230]
CtCNB1_R0044  tRNA-Met [KO:K14230]
CtCNB1_R0007  tRNA-Phe [KO:K14231]
CtCNB1_R0008  tRNA-Phe [KO:K14231]
CtCNB1_R0015  tRNA-Pro [KO:K14232]
CtCNB1_R0047  tRNA-Pro [KO:K14232]
CtCNB1_R0048  tRNA-Pro [KO:K14232]
CtCNB1_R0063  tRNA-Pro [KO:K14232]
CtCNB1_R0045  tRNA-Pro [KO:K14232]
CtCNB1_R0054  tRNA-Pro [KO:K14232]
CtCNB1_R0024  tRNA-Ser [KO:K14233]
CtCNB1_R0077  tRNA-Ser [KO:K14233]
CtCNB1_R0055  tRNA-Ser [KO:K14233]
CtCNB1_R0056  tRNA-Ser [KO:K14233]
CtCNB1_R0072  tRNA-Ser [KO:K14233]
CtCNB1_R0005  tRNA-Thr [KO:K14234]
CtCNB1_R0062  tRNA-Thr [KO:K14234]
CtCNB1_R0014  tRNA-Thr [KO:K14234]
CtCNB1_R0006  tRNA-Trp [KO:K14235]
CtCNB1_R0003  tRNA-Tyr [KO:K14236]
CtCNB1_R0050  tRNA-Val [KO:K14237]
CtCNB1_R0082  tRNA-Val [KO:K14237]
CtCNB1_R0059  tRNA-Val [KO:K14237]
CtCNB1_R0081  tRNA-Val [KO:K14237]
CtCNB1_R0057  tRNA-Val [KO:K14237]
CtCNB1_R0061  tRNA-Val [KO:K14237]
CtCNB1_1408  glutamyl-tRNA synthetase [KO:K01885] [EC:6.1.1.17]
CtCNB1_0277  GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [KO:K02433] [EC:6.3.5.6 6.3.5.7]
CtCNB1_4151  Amidase [KO:K02433] [EC:6.3.5.6 6.3.5.7]
CtCNB1_3233  Amidase [KO:K02433] [EC:6.3.5.6 6.3.5.7]
CtCNB1_0276  GatB, Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit(PET112-like protein) [KO:K02434] [EC:6.3.5.6 6.3.5.7]
CtCNB1_0278  GatC, Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit [KO:K02435] [EC:6.3.5.6 6.3.5.7]
CtCNB1_3311  glutaminyl-tRNA synthetase [KO:K01886] [EC:6.1.1.18]
CtCNB1_2400  alanyl-tRNA synthetase [KO:K01872] [EC:6.1.1.7]
CtCNB1_0800  aspartyl-tRNA synthetase [KO:K01876] [EC:6.1.1.12]
CtCNB1_4219  glycyl-tRNA synthetase, alpha subunit [KO:K01878] [EC:6.1.1.14]
CtCNB1_4218  glycyl-tRNA synthetase, beta subunit [KO:K01879] [EC:6.1.1.14]
CtCNB1_3031  threonyl-tRNA synthetase [KO:K01868] [EC:6.1.1.3]
CtCNB1_3818  seryl-tRNA synthetase [KO:K01875] [EC:6.1.1.11]
CtCNB1_2125  L-seryl-tRNA selenium transferase [KO:K01042] [EC:2.9.1.1]
CtCNB1_1202  cysteinyl-tRNA synthetase [KO:K01883] [EC:6.1.1.16]
CtCNB1_3850  methionyl-tRNA synthetase [KO:K01874] [EC:6.1.1.10]
CtCNB1_4731  methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
CtCNB1_3543  valyl-tRNA synthetase [KO:K01873] [EC:6.1.1.9]
CtCNB1_4567  hypothetical protein [KO:K01869] [EC:6.1.1.4]
CtCNB1_0861  isoleucyl-tRNA synthetase [KO:K01870] [EC:6.1.1.5]
CtCNB1_0995  lysyl-tRNA synthetase [KO:K04567] [EC:6.1.1.6]
CtCNB1_4544  arginyl-tRNA synthetase [KO:K01887] [EC:6.1.1.19]
CtCNB1_0769  prolyl-tRNA synthetase [KO:K01881] [EC:6.1.1.15]
CtCNB1_3287  histidyl-tRNA synthetase [KO:K01892] [EC:6.1.1.21]
CtCNB1_3027  phenylalanyl-tRNA synthetase, alpha subunit [KO:K01889] [EC:6.1.1.20]
CtCNB1_3026  phenylalanyl-tRNA synthetase, beta subunit [KO:K01890] [EC:6.1.1.20]
CtCNB1_0553  tyrosyl-tRNA synthetase [KO:K01866] [EC:6.1.1.1]
CtCNB1_0832  tryptophanyl-tRNA synthetase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
ctt00250  Alanine, aspartate and glutamate metabolism
ctt00260  Glycine, serine and threonine metabolism
ctt00270  Cysteine and methionine metabolism
ctt00290  Valine, leucine and isoleucine biosynthesis
ctt00300  Lysine biosynthesis
ctt00330  Arginine and proline metabolism
ctt00340  Histidine metabolism
ctt00380  Tryptophan metabolism
ctt00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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