KEGG   PATHWAY: cvn03250
Entry
cvn03250                    Pathway                                
Name
Viral life cycle - HIV-1 - Crassostrea virginica (eastern oyster)
Class
Genetic Information Processing; Information processing in viruses
Pathway map
cvn03250  Viral life cycle - HIV-1
cvn03250

Organism
Crassostrea virginica (eastern oyster) [GN:cvn]
Gene
111106750  protein bicaudal D-like isoform X1 [KO:K18739]
111108190  protein bicaudal D-like isoform X1 [KO:K18739]
111132399  deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like [KO:K22544] [EC:3.1.5.-]
111134047  deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like isoform X1 [KO:K22544] [EC:3.1.5.-]
111134907  deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like [KO:K22544] [EC:3.1.5.-]
111136499  deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like [KO:K22544] [EC:3.1.5.-]
111099139  deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like isoform X1 [KO:K22544] [EC:3.1.5.-]
111136962  deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like isoform X1 [KO:K22544] [EC:3.1.5.-]
111136963  deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like [KO:K22544] [EC:3.1.5.-]
111136964  deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like [KO:K22544] [EC:3.1.5.-]
111136965  deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like isoform X1 [KO:K22544] [EC:3.1.5.-]
111138247  deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like isoform X1 [KO:K22544] [EC:3.1.5.-]
111123149  putative peptidyl-prolyl cis-trans isomerase dodo [KO:K09578] [EC:5.2.1.8]
111124977  putative peptidyl-prolyl cis-trans isomerase dodo [KO:K09578] [EC:5.2.1.8]
111135329  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A-like isoform X1 [KO:K11648]
111131116  peptidyl-prolyl cis-trans isomerase-like [KO:K03767] [EC:5.2.1.8]
111130886  LOW QUALITY PROTEIN: cleavage and polyadenylation specificity factor subunit 6-like [KO:K14398]
111104027  transportin-3-like isoform X1 [KO:K15436]
111124696  E3 SUMO-protein ligase RanBP2-like [KO:K12172] [EC:2.3.2.-]
111124701  E3 SUMO-protein ligase RanBP2-like isoform X1 [KO:K12172] [EC:2.3.2.-]
111123211  LOW QUALITY PROTEIN: CREB-binding protein-like [KO:K04498] [EC:2.3.1.48]
111110601  histone acetyltransferase KAT2B-like [KO:K06062] [EC:2.3.1.48]
111123134  cyclin-dependent kinase 9-like [KO:K02211] [EC:2.7.11.22 2.7.11.23]
111123417  cyclin-dependent kinase 9-like [KO:K02211] [EC:2.7.11.22 2.7.11.23]
111118801  LOW QUALITY PROTEIN: cyclin-T2-like [KO:K15188]
111111579  RNA polymerase II elongation factor ELL-like [KO:K15183]
111137756  negative elongation factor A-like [KO:K15179]
111127060  LOW QUALITY PROTEIN: negative elongation factor B-like [KO:K15180]
111102475  negative elongation factor D-like isoform X1 [KO:K15181]
111125986  negative elongation factor E-like [KO:K15182]
111136465  transcription elongation factor SPT4-like [KO:K15171]
111129825  exportin-1-like [KO:K14290]
111114937  GTP-binding nuclear protein Ran [KO:K07936]
111105159  furin-like protease kpc-1 [KO:K01349] [EC:3.4.21.75]
111123992  neuroendocrine convertase 2-like isoform X1 [KO:K01349] [EC:3.4.21.75]
111128997  LOW QUALITY PROTEIN: furin-like protease kpc-1 [KO:K01349] [EC:3.4.21.75]
111130748  serine incorporator 5-like [KO:K25655]
111128189  serine incorporator 5-like [KO:K25655]
111120869  hepatocyte growth factor-regulated tyrosine kinase substrate-like [KO:K12182]
111121127  hepatocyte growth factor-regulated tyrosine kinase substrate-like [KO:K12182]
111099630  tumor susceptibility gene 101 protein-like [KO:K12183]
111099725  tumor susceptibility gene 101 protein-like [KO:K12183]
111100012  tumor susceptibility gene 101 protein-like [KO:K12183]
111100430  tumor susceptibility gene 101 protein-like [KO:K12183]
111117660  charged multivesicular body protein 6-B-like [KO:K12195]
111138197  charged multivesicular body protein 4b-like [KO:K12194]
111135084  programmed cell death 6-interacting protein-like isoform X1 [KO:K12200]
111111648  vacuolar protein sorting-associated protein 4-like isoform X1 [KO:K12196]
111135601  vacuolar protein sorting-associated protein 4-like [KO:K12196]
Reference
PMID:27357278
  Authors
Li G, De Clercq E
  Title
HIV Genome-Wide Protein Associations: a Review of 30 Years of Research.
  Journal
Microbiol Mol Biol Rev 80:679-731 (2016)
DOI:10.1128/MMBR.00065-15
Reference
PMID:21284899
  Authors
Tagliamonte M, Tornesello ML, Buonaguro FM, Buonaguro L
  Title
Conformational HIV-1 envelope on particulate structures: a tool for chemokine coreceptor binding studies.
  Journal
J Transl Med 9 Suppl 1:S1 (2011)
DOI:10.1186/1479-5876-9-S1-S1
Reference
PMID:31028522
  Authors
Novikova M, Zhang Y, Freed EO, Peng K
  Title
Multiple Roles of HIV-1 Capsid during the Virus Replication Cycle.
  Journal
Virol Sin 34:119-134 (2019)
DOI:10.1007/s12250-019-00095-3
Reference
PMID:30286189
  Authors
Rawle DJ, Harrich D
  Title
Toward the "unravelling" of HIV: Host cell factors involved in HIV-1 core uncoating.
  Journal
PLoS Pathog 14:e1007270 (2018)
DOI:10.1371/journal.ppat.1007270
Reference
PMID:25036886
  Authors
Le Sage V, Mouland AJ, Valiente-Echeverria F
  Title
Roles of HIV-1 capsid in viral replication and immune evasion.
  Journal
Virus Res 193:116-29 (2014)
DOI:10.1016/j.virusres.2014.07.010
Reference
PMID:32429351
  Authors
Murphy RE, Saad JS
  Title
The Interplay between HIV-1 Gag Binding to the Plasma Membrane and Env Incorporation.
  Journal
Viruses 12:E548 (2020)
DOI:10.3390/v12050548
Reference
PMID:21360054
  Authors
He N, Zhou Q
  Title
New insights into the control of HIV-1 transcription: when Tat meets the 7SK snRNP and super elongation complex (SEC).
  Journal
J Neuroimmune Pharmacol 6:260-8 (2011)
DOI:10.1007/s11481-011-9267-6
Reference
PMID:19865606
  Authors
Pincetic A, Leis J
  Title
The Mechanism of Budding of Retroviruses From Cell Membranes.
  Journal
Adv Virol 2009:6239691-6239699 (2009)
DOI:10.1155/2009/623969
Reference
PMID:32858867
  Authors
Kleinpeter AB, Freed EO
  Title
HIV-1 Maturation: Lessons Learned from Inhibitors.
  Journal
Viruses 12:E940 (2020)
DOI:10.3390/v12090940
Related
pathway
cvn03013  Nucleocytoplasmic transport
cvn04144  Endocytosis
KO pathway
ko03250   
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