KEGG   PATHWAY: dec00970
Entry
dec00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Dehalobacter sp. CF
Class
Genetic Information Processing; Translation
Pathway map
dec00970  Aminoacyl-tRNA biosynthesis
dec00970

Organism
Dehalobacter sp. CF [GN:dec]
Gene
DCF50_r20  tRNA-Ala [KO:K14218]
DCF50_r49  tRNA-Ala [KO:K14218]
DCF50_r32  tRNA-Ala [KO:K14218]
DCF50_r2  tRNA-Arg [KO:K14219]
DCF50_r40  tRNA-Arg [KO:K14219]
DCF50_r10  tRNA-Arg [KO:K14219]
DCF50_r55  tRNA-Arg [KO:K14219]
DCF50_r36  tRNA-Asn [KO:K14220]
DCF50_r51  tRNA-Asn [KO:K14220]
DCF50_r28  tRNA-Asp [KO:K14221]
DCF50_r45  tRNA-Asp [KO:K14221]
DCF50_r25  tRNA-Cys [KO:K14222]
DCF50_r44  tRNA-Gln [KO:K14223]
DCF50_r53  tRNA-Gln [KO:K14223]
DCF50_r47  tRNA-Glu [KO:K14224]
DCF50_r59  tRNA-Glu [KO:K14224]
DCF50_r26  tRNA-Gly [KO:K14225]
DCF50_r41  tRNA-Gly [KO:K14225]
DCF50_r34  tRNA-Gly [KO:K14225]
DCF50_r57  tRNA-Gly [KO:K14225]
DCF50_r54  tRNA-His [KO:K14226]
DCF50_r21  tRNA-Ile [KO:K14227]
DCF50_r12  tRNA-Leu [KO:K14228]
DCF50_r11  tRNA-Leu [KO:K14228]
DCF50_r24  tRNA-Leu [KO:K14228]
DCF50_r38  tRNA-Leu [KO:K14228]
DCF50_r52  tRNA-Leu [KO:K14228]
DCF50_r42  tRNA-Lys [KO:K14229]
DCF50_r60  tRNA-Lys [KO:K14229]
DCF50_r43  tRNA-Lys [KO:K14229]
DCF50_r50  tRNA-Met [KO:K14230]
DCF50_r15  tRNA-Met [KO:K14230]
DCF50_r35  tRNA-Met [KO:K14230]
DCF50_r27  tRNA-Phe [KO:K14231]
DCF50_r58  tRNA-Phe [KO:K14231]
DCF50_r8  tRNA-Pro [KO:K14232]
DCF50_r56  tRNA-Pro [KO:K14232]
DCF50_r13  tRNA-Pro [KO:K14232]
DCF50_r3  tRNA-Ser [KO:K14233]
DCF50_r4  tRNA-Ser [KO:K14233]
DCF50_r37  tRNA-Ser [KO:K14233]
DCF50_r1  tRNA-Ser [KO:K14233]
DCF50_r17  tRNA-Thr [KO:K14234]
DCF50_r39  tRNA-Thr [KO:K14234]
DCF50_r14  tRNA-Thr [KO:K14234]
DCF50_r9  tRNA-Trp [KO:K14235]
DCF50_r16  tRNA-Tyr [KO:K14236]
DCF50_r46  tRNA-Val [KO:K14237]
DCF50_r29  tRNA-Val [KO:K14237]
DCF50_r48  tRNA-Val [KO:K14237]
DCF50_r23  tRNA-Val [KO:K14237]
DCF50_p1926  Glutamyl-tRNA synthetase, Glutamyl-tRNA(Gln) synthetase [KO:K09698] [EC:6.1.1.24]
DCF50_p1417  gatA; Aspartyl-tRNA(Asn) amidotransferase subunit A, Glutamyl-tRNA(Gln) amidotransferase subunit A [KO:K02433] [EC:6.3.5.6 6.3.5.7]
DCF50_p1416  gatB; Aspartyl-tRNA(Asn) amidotransferase subunit B, Glutamyl-tRNA(Gln) amidotransferase subunit B [KO:K02434] [EC:6.3.5.6 6.3.5.7]
DCF50_p1418  gatC; Aspartyl-tRNA(Asn) amidotransferase subunit C, Glutamyl-tRNA(Gln) amidotransferase subunit C [KO:K02435] [EC:6.3.5.6 6.3.5.7]
DCF50_p594  Glutaminyl-tRNA synthetase [KO:K01886] [EC:6.1.1.18]
DCF50_p461  Alanyl-tRNA synthetase [KO:K01872] [EC:6.1.1.7]
DCF50_p895  Aspartyl-tRNA synthetase [KO:K01876] [EC:6.1.1.12]
DCF50_p2911  Asparaginyl-tRNA synthetase [KO:K01893] [EC:6.1.1.22]
DCF50_p2545  Glycyl-tRNA synthetase alpha chain [KO:K01878] [EC:6.1.1.14]
DCF50_p2544  Glycyl-tRNA synthetase beta chain [KO:K01879] [EC:6.1.1.14]
DCF50_p1995  Threonyl-tRNA synthetase [KO:K01868] [EC:6.1.1.3]
DCF50_p9  serS; Seryl-tRNA synthetase [KO:K01875] [EC:6.1.1.11]
DCF50_p1515  L-seryl-tRNA(Sec) selenium transferase [KO:K01042] [EC:2.9.1.1]
DCF50_p1925  Cysteinyl-tRNA synthetase [KO:K01883] [EC:6.1.1.16]
DCF50_p277  Methionyl-tRNA synthetase [KO:K01874] [EC:6.1.1.10]
DCF50_p2189  Methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
DCF50_p2624  Valyl-tRNA synthetase [KO:K01873] [EC:6.1.1.9]
DCF50_p2591  Leucyl-tRNA synthetase [KO:K01869] [EC:6.1.1.4]
DCF50_p2575  Isoleucyl-tRNA synthetase [KO:K01870] [EC:6.1.1.5]
DCF50_p356  Lysyl-tRNA synthetase (class II) [KO:K04567] [EC:6.1.1.6]
DCF50_p2906  Arginyl-tRNA synthetase [KO:K01887] [EC:6.1.1.19]
DCF50_p2091  Prolyl-tRNA synthetase [KO:K01881] [EC:6.1.1.15]
DCF50_p896  Histidyl-tRNA synthetase [KO:K01892] [EC:6.1.1.21]
DCF50_p1986  Phenylalanyl-tRNA synthetase alpha chain [KO:K01889] [EC:6.1.1.20]
DCF50_p1985  Phenylalanyl-tRNA synthetase beta chain [KO:K01890] [EC:6.1.1.20]
DCF50_p1953  Tyrosyl-tRNA synthetase [KO:K01866] [EC:6.1.1.1]
DCF50_p569  Tryptophanyl-tRNA synthetase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
dec00250  Alanine, aspartate and glutamate metabolism
dec00260  Glycine, serine and threonine metabolism
dec00270  Cysteine and methionine metabolism
dec00290  Valine, leucine and isoleucine biosynthesis
dec00300  Lysine biosynthesis
dec00330  Arginine and proline metabolism
dec00340  Histidine metabolism
dec00380  Tryptophan metabolism
dec00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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