KEGG   PATHWAY: def00010
Entry
def00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Desulfovibrio sp. G11
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
def00010  Glycolysis / Gluconeogenesis
def00010

Module
def_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:def00010]
def_M00002  Glycolysis, core module involving three-carbon compounds [PATH:def00010]
def_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:def00010]
Other DBs
GO: 0006096 0006094
Organism
Desulfovibrio sp. G11 [GN:def]
Gene
CNY67_09110  hypothetical protein [KO:K00845] [EC:2.7.1.2]
CNY67_09965  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
CNY67_06185  diphosphate--fructose-6-phosphate 1-phosphotransferase [KO:K00850] [EC:2.7.1.11]
CNY67_07870  class 1 fructose-bisphosphatase [KO:K03841] [EC:3.1.3.11]
CNY67_10470  glpX; fructose-bisphosphatase class II [KO:K02446] [EC:3.1.3.11]
CNY67_00730  fba; fructose-1,6-bisphosphate aldolase, class II [KO:K01624] [EC:4.1.2.13]
CNY67_12565  fructose-bisphosphate aldolase [KO:K16306] [EC:4.1.2.13 2.2.1.10]
CNY67_07980  triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
CNY67_00890  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
CNY67_00735  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
CNY67_12005  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
CNY67_11475  2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
CNY67_00990  enolase [KO:K01689] [EC:4.2.1.11]
CNY67_06660  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
CNY67_04680  pyruvate, phosphate dikinase [KO:K01007] [EC:2.7.9.2]
CNY67_05120  phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
CNY67_05135  phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
CNY67_05215  phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
CNY67_00845  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
CNY67_09265  pyridine nucleotide-disulfide oxidoreductase [KO:K00382] [EC:1.8.1.4]
CNY67_15330  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
CNY67_13490  nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase [KO:K03737] [EC:1.2.7.1 1.2.7.-]
CNY67_00775  3-methyl-2-oxobutanoate dehydrogenase subunit VorB [KO:K00174] [EC:1.2.7.3 1.2.7.11]
CNY67_00770  2-oxoglutarate oxidoreductase [KO:K00175] [EC:1.2.7.3 1.2.7.11]
CNY67_02445  L-threonine dehydrogenase [KO:K13954] [EC:1.1.1.1]
CNY67_02230  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
CNY67_03710  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
CNY67_07810  alpha-D-glucose phosphate-specific phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
def00020  Citrate cycle (TCA cycle)
def00030  Pentose phosphate pathway
def00500  Starch and sucrose metabolism
def00620  Pyruvate metabolism
def00640  Propanoate metabolism
def00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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