KEGG   PATHWAY: des00010
Entry
des00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Desulfuromonas soudanensis
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
des00010  Glycolysis / Gluconeogenesis
des00010

Module
des_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:des00010]
des_M00002  Glycolysis, core module involving three-carbon compounds [PATH:des00010]
des_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:des00010]
des_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:des00010]
Other DBs
GO: 0006096 0006094
Organism
Desulfuromonas soudanensis [GN:des]
Gene
DSOUD_2055  putative N-terminal HTH domain-containing sugar kinase of the NBD/HSP70 family [KO:K25026] [EC:2.7.1.2]
DSOUD_1708  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
DSOUD_2302  pfk-2; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
DSOUD_2054  pfk-1; 6-phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
DSOUD_1467  fbp; D-fructose 1,6-bisphosphatase [KO:K03841] [EC:3.1.3.11]
DSOUD_2976  fructose-1,6-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
DSOUD_1775  tpi; triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
DSOUD_2977  glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
DSOUD_1777  gapA; glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
DSOUD_1776  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
DSOUD_0492  gpmI; phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
DSOUD_1744  phosphoglycerate mutase [KO:K15635] [EC:5.4.2.12]
DSOUD_1649  eno; enolase [KO:K01689] [EC:4.2.1.11]
DSOUD_3571  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
DSOUD_3011  ppdK; pyruvate phosphate dikinase [KO:K01006] [EC:2.7.9.1]
DSOUD_1728  ppsA; phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
DSOUD_2781  pdhA; pyruvate dehydrogenase E1 component, alpha subunit [KO:K00161] [EC:1.2.4.1]
DSOUD_2892  bkdA; pyruvate dehydrogenase E1 component, alpha subunit [KO:K00161] [EC:1.2.4.1]
DSOUD_2893  bkdB; pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component [KO:K00162] [EC:1.2.4.1]
DSOUD_2780  pdhB; pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component [KO:K00162] [EC:1.2.4.1]
DSOUD_2779  pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component [KO:K00627] [EC:2.3.1.12]
DSOUD_2894  bkdF; pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component [KO:K00627] [EC:2.3.1.12]
DSOUD_2790  lpdA-1; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
DSOUD_0375  por-2; pyruvate-flavodoxin oxidoreductase [KO:K03737] [EC:1.2.7.1 1.2.7.-]
DSOUD_0297  por-1; pyruvate-flavodoxin oxidoreductase [KO:K03737] [EC:1.2.7.1 1.2.7.-]
DSOUD_1747  vorA; pyruvate:ferredoxin oxidoreductase, alpha subunit [KO:K00174] [EC:1.2.7.3 1.2.7.11]
DSOUD_1470  korA; 2-oxoglutarate:ferredoxin oxidoreductase, alpha subunit [KO:K00174] [EC:1.2.7.3 1.2.7.11]
DSOUD_1748  vorB; pyruvate:ferredoxin oxidoreductase, beta subunit [KO:K00175] [EC:1.2.7.3 1.2.7.11]
DSOUD_1469  korB; 2-oxoglutarate:ferredoxin oxidoreductase, beta subunit [KO:K00175] [EC:1.2.7.3 1.2.7.11]
DSOUD_1075  alcohol dehydrogenase, class IV [KO:K13954] [EC:1.1.1.1]
DSOUD_0487  aldehyde dehydrogenase [KO:K00131] [EC:1.2.1.9]
DSOUD_0091  phosphoenolpyruvate carboxykinase [KO:K01610] [EC:4.1.1.49]
DSOUD_1371  phosphoenolpyruvate carboxykinase [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
des00020  Citrate cycle (TCA cycle)
des00030  Pentose phosphate pathway
des00500  Starch and sucrose metabolism
des00620  Pyruvate metabolism
des00640  Propanoate metabolism
des00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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