KEGG   PATHWAY: dfm00010
Entry
dfm00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Dorea formicigenerans
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
dfm00010  Glycolysis / Gluconeogenesis
dfm00010

Module
dfm_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:dfm00010]
dfm_M00002  Glycolysis, core module involving three-carbon compounds [PATH:dfm00010]
dfm_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:dfm00010]
dfm_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:dfm00010]
Other DBs
GO: 0006096 0006094
Organism
Dorea formicigenerans [GN:dfm]
Gene
NQ560_09410  ROK family glucokinase [KO:K25026] [EC:2.7.1.2]
NQ560_14670  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
NQ560_13295  pfkA; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
NQ560_12160  6-phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
NQ560_14230  6-phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
NQ560_04855  fructose-bisphosphatase class III [KO:K04041] [EC:3.1.3.11]
NQ560_09365  fructose-bisphosphatase class III [KO:K04041] [EC:3.1.3.11]
NQ560_00860  fba; class II fructose-1,6-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
NQ560_08205  tpiA; triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
NQ560_06255  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
NQ560_08215  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
NQ560_08210  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
NQ560_08195  gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
NQ560_11595  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
NQ560_08170  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
NQ560_10885  ppdK; pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
NQ560_00220  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
NQ560_04065  porA; pyruvate ferredoxin oxidoreductase [KO:K00169] [EC:1.2.7.1]
NQ560_04070  thiamine pyrophosphate-dependent enzyme [KO:K00170] [EC:1.2.7.1]
NQ560_04055  2-oxoacid:acceptor oxidoreductase family protein [KO:K00172] [EC:1.2.7.1]
NQ560_04060  4Fe-4S binding protein [KO:K00171] [EC:1.2.7.1]
NQ560_11015  nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase [KO:K03737] [EC:1.2.7.1 1.2.7.-]
NQ560_05485  L-lactate dehydrogenase [KO:K00016] [EC:1.1.1.27]
NQ560_01980  adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase [KO:K04072] [EC:1.2.1.10 1.1.1.1]
NQ560_03390  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
NQ560_13600  galactose mutarotase [KO:K01785] [EC:5.1.3.3]
NQ560_13700  phospho-sugar mutase [KO:K01835] [EC:5.4.2.2]
NQ560_13425  pckA; phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
dfm00020  Citrate cycle (TCA cycle)
dfm00030  Pentose phosphate pathway
dfm00500  Starch and sucrose metabolism
dfm00620  Pyruvate metabolism
dfm00640  Propanoate metabolism
dfm00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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