KEGG   PATHWAY: dhy00010
Entry
dhy00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Maridesulfovibrio hydrothermalis
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
dhy00010  Glycolysis / Gluconeogenesis
dhy00010

Module
dhy_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:dhy00010]
dhy_M00002  Glycolysis, core module involving three-carbon compounds [PATH:dhy00010]
dhy_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:dhy00010]
dhy_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:dhy00010]
Other DBs
GO: 0006096 0006094
Organism
Maridesulfovibrio hydrothermalis [GN:dhy]
Gene
DESAM_22598  Glucokinase [KO:K00845] [EC:2.7.1.2]
DESAM_20797  Glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
DESAM_20713  PFK; 6-phosphofructokinase 6 [KO:K00850] [EC:2.7.1.11]
DESAM_22125  fbp; Fructose-1,6-bisphosphatase class 1 [KO:K03841] [EC:3.1.3.11]
DESAM_22951  ywjI; putative fructose 1,6-bisphosphatase class II [KO:K02446] [EC:3.1.3.11]
DESAM_20985  ywjI; putative fructose 1,6-bisphosphatase class II [KO:K02446] [EC:3.1.3.11]
DESAM_21220  Fructose-bisphosphate aldolase [KO:K11645] [EC:4.1.2.13]
DESAM_22359  fba; Fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
DESAM_22956  fba; Fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
DESAM_21548  Uncharacterized aldolase aq_1554 [KO:K16306] [EC:4.1.2.13 2.2.1.10]
DESAM_22316  tpiA; triose phosphate isomerase [KO:K01803] [EC:5.3.1.1]
DESAM_20814  gapA; glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
DESAM_22360  gapA; glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
DESAM_22954  gapA; glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
DESAM_22317  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
DESAM_22957  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
DESAM_22332  gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
DESAM_22581  apgM; putative 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15635] [EC:5.4.2.12]
DESAM_21091  eno; enolase [KO:K01689] [EC:4.2.1.11]
DESAM_10051  pyk; Pyruvate kinase [KO:K00873] [EC:2.7.1.40]
DESAM_21850  Pyruvate, water dikinase [KO:K01007] [EC:2.7.9.2]
DESAM_21448  Pyruvate, water dikinase [KO:K01007] [EC:2.7.9.2]
DESAM_22210  Pyruvate phosphate dikinase PEP/pyruvate-binding [KO:K01007] [EC:2.7.9.2]
DESAM_22851  Pyruvate phosphate dikinase PEP/pyruvate-binding [KO:K01007] [EC:2.7.9.2]
DESAM_21578  Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
DESAM_20169  nifJ; Pyruvate-flavodoxin oxidoreductase [KO:K03737] [EC:1.2.7.1 1.2.7.-]
DESAM_22670  nifJ; Pyruvate-flavodoxin oxidoreductase [KO:K03737] [EC:1.2.7.1 1.2.7.-]
DESAM_10089  korA; 2-oxoglutarate synthase subunit korA [KO:K00174] [EC:1.2.7.3 1.2.7.11]
DESAM_20736  vorB; Ketoisovalerate oxidoreductase subunit vorB [KO:K00174] [EC:1.2.7.3 1.2.7.11]
DESAM_10090  korB; 2-oxoglutarate synthase subunit korB [KO:K00175] [EC:1.2.7.3 1.2.7.11]
DESAM_20737  Thiamine pyrophosphate protein domain protein TPP-binding [KO:K00175] [EC:1.2.7.3 1.2.7.11]
DESAM_20447  yiaY; Fe-containing alcohol dehydrogenase [KO:K13954] [EC:1.1.1.1]
DESAM_22632  Iron-containing alcohol dehydrogenase [KO:K00001] [EC:1.1.1.1]
DESAM_20444  Iron-containing alcohol dehydrogenase [KO:K00001] [EC:1.1.1.1]
DESAM_20564  Acsm3; Acyl-coenzyme A synthetase ACSM3, mitochondrial [KO:K01895] [EC:6.2.1.1]
DESAM_20863  acs; acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
DESAM_21612  acs; acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
DESAM_20633  acsA; Acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
DESAM_21572  CoA-binding domain protein [KO:K24012] [EC:6.2.1.13]
DESAM_21289  CoA-binding domain protein [KO:K24012] [EC:6.2.1.13]
DESAM_22887  pgm; phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
DESAM_20561  algC; Phosphomannomutase/phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
DESAM_20122  conserved protein of unknown function [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
dhy00020  Citrate cycle (TCA cycle)
dhy00030  Pentose phosphate pathway
dhy00500  Starch and sucrose metabolism
dhy00620  Pyruvate metabolism
dhy00640  Propanoate metabolism
dhy00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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