KEGG   PATHWAY: dka00010
Entry
dka00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Desulfurococcus amylolyticus 1221n
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
dka00010  Glycolysis / Gluconeogenesis
dka00010

Module
dka_M00002  Glycolysis, core module involving three-carbon compounds [PATH:dka00010]
dka_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:dka00010]
dka_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:dka00010]
Other DBs
GO: 0006096 0006094
Organism
Desulfurococcus amylolyticus 1221n [GN:dka]
Gene
DKAM_0546  Glucokinase (ROK family protein) [KO:K25026] [EC:2.7.1.2]
DKAM_1010  bifunctional phosphoglucose/phosphomannose isomerase [KO:K15916] [EC:5.3.1.9 5.3.1.8]
DKAM_0616  fructose-bisphosphate aldolase [KO:K11645] [EC:4.1.2.13]
DKAM_1247  Fructose-1,6-bisphosphatase [KO:K01622] [EC:4.1.2.13 3.1.3.11]
DKAM_1246  triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
DKAM_0185  Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) [KO:K00150] [EC:1.2.1.59]
DKAM_0184  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
DKAM_0338  phosphonopyruvate decarboxylase-related protein [KO:K15635] [EC:5.4.2.12]
DKAM_1440  enolase [KO:K01689] [EC:4.2.1.11]
DKAM_1243  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
DKAM_0631  phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
DKAM_0296  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
DKAM_0579  Pyruvate synthase subunit porA [KO:K00169] [EC:1.2.7.1]
DKAM_1187  Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit [KO:K00169] [EC:1.2.7.1]
DKAM_1188  Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit [KO:K00170] [EC:1.2.7.1]
DKAM_0578  Pyruvate synthase subunit porB [KO:K00170] [EC:1.2.7.1]
DKAM_0581  Pyruvate synthase subunit porC [KO:K00172] [EC:1.2.7.1]
DKAM_1185  Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit [KO:K00172] [EC:1.2.7.1]
DKAM_0580  Pyruvate synthase subunit porD [KO:K00171] [EC:1.2.7.1]
DKAM_1186  Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit [KO:K00171] [EC:1.2.7.1]
DKAM_0535  2-oxoglutarate ferredoxin oxidoreductase subunit alpha [KO:K00174] [EC:1.2.7.3 1.2.7.11]
DKAM_0534  2-oxoglutarate ferredoxin oxidoreductase, beta subunit [KO:K00175] [EC:1.2.7.3 1.2.7.11]
DKAM_1133  Alcohol dehydrogenase, zinc-containing [KO:K13953] [EC:1.1.1.1]
DKAM_0846  Acetyl-CoA synthetase [KO:K01905] [EC:6.2.1.13]
DKAM_0930  AcdA-1 acetate--coA ligase (ADP-forming), alpha chain [KO:K01905] [EC:6.2.1.13]
DKAM_0929  AcdB acetate--coA ligase (ADP-forming), beta chain [KO:K22224] [EC:6.2.1.13]
DKAM_0725  Branched-chain acyl-CoA synthetase (ADP-forming) beta subunit / acetyl-CoA synthetase (ADP-forming) beta subunit [KO:K22224] [EC:6.2.1.13]
DKAM_0012  Phosphomannomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
DKAM_0110  phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I [KO:K15778] [EC:5.4.2.8 5.4.2.2]
DKAM_0499  Aldehyde ferredoxin oxidoreductase-like protein [KO:K11389] [EC:1.2.7.6]
DKAM_1444  NADP-dependent glyceraldehyde-3-phosphate dehydrogenase [KO:K18978] [EC:1.2.1.90]
DKAM_1379  phosphoenolpyruvate carboxykinase [KO:K01596] [EC:4.1.1.32]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
dka00020  Citrate cycle (TCA cycle)
dka00030  Pentose phosphate pathway
dka00500  Starch and sucrose metabolism
dka00620  Pyruvate metabolism
dka00640  Propanoate metabolism
dka00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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