KEGG   PATHWAY: dmi00970
Entry
dmi00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Desulfosporosinus meridiei
Class
Genetic Information Processing; Translation
Pathway map
dmi00970  Aminoacyl-tRNA biosynthesis
dmi00970

Organism
Desulfosporosinus meridiei [GN:dmi]
Gene
Desmer_0096  tRNA-Ala [KO:K14218]
Desmer_1738  tRNA-Ala [KO:K14218]
Desmer_0153  tRNA-Ala [KO:K14218]
Desmer_1558  tRNA-Ala [KO:K14218]
Desmer_2895  tRNA-Arg [KO:K14219]
Desmer_0113  tRNA-Arg [KO:K14219]
Desmer_2637  tRNA-Arg [KO:K14219]
Desmer_0012  tRNA-Arg [KO:K14219]
Desmer_0013  tRNA-Arg [KO:K14219]
Desmer_4233  tRNA-Arg [KO:K14219]
Desmer_0117  tRNA-Asn [KO:K14220]
Desmer_2891  tRNA-Asn [KO:K14220]
Desmer_3956  tRNA-Asn [KO:K14220]
Desmer_1564  tRNA-Asp [KO:K14221]
Desmer_0128  tRNA-Asp [KO:K14221]
Desmer_0107  tRNA-Asp [KO:K14221]
Desmer_2900  tRNA-Asp [KO:K14221]
Desmer_0131  tRNA-Cys [KO:K14222]
Desmer_1566  tRNA-Cys [KO:K14222]
Desmer_0110  tRNA-Gln [KO:K14223]
Desmer_2898  tRNA-Gln [KO:K14223]
Desmer_0105  tRNA-Glu [KO:K14224]
Desmer_2901  tRNA-Glu [KO:K14224]
Desmer_1562  tRNA-Glu [KO:K14224]
Desmer_4624  tRNA-Glu [KO:K14224]
Desmer_0130  tRNA-Gly [KO:K14225]
Desmer_2896  tRNA-Gly [KO:K14225]
Desmer_0112  tRNA-Gly [KO:K14225]
Desmer_0119  tRNA-Gly [KO:K14225]
Desmer_2889  tRNA-Gly [KO:K14225]
Desmer_3576  tRNA-Gly [KO:K14225]
Desmer_4620  tRNA-Gly [KO:K14225]
Desmer_4232  tRNA-His [KO:K14226]
Desmer_0095  tRNA-Ile [KO:K14227]
Desmer_1737  tRNA-Ile [KO:K14227]
Desmer_4225  tRNA-Leu [KO:K14228]
Desmer_0115  tRNA-Leu [KO:K14228]
Desmer_2893  tRNA-Leu [KO:K14228]
Desmer_2855  tRNA-Leu [KO:K14228]
Desmer_0132  tRNA-Leu [KO:K14228]
Desmer_2234  tRNA-Leu [KO:K14228]
Desmer_1567  tRNA-Leu [KO:K14228]
Desmer_1280  tRNA-Leu [KO:K14228]
Desmer_2502  tRNA-Lys [KO:K14229]
Desmer_3239  tRNA-Lys [KO:K14229]
Desmer_4626  tRNA-Lys [KO:K14229]
Desmer_2235  tRNA-Lys [KO:K14229]
Desmer_2897  tRNA-Lys [KO:K14229]
Desmer_0111  tRNA-Lys [KO:K14229]
Desmer_3955  tRNA-Met [KO:K14230]
Desmer_0109  tRNA-Met [KO:K14230]
Desmer_0230  tRNA-Met [KO:K14230]
Desmer_0118  tRNA-Met [KO:K14230]
Desmer_2890  tRNA-Met [KO:K14230]
Desmer_0129  tRNA-Phe [KO:K14231]
Desmer_4623  tRNA-Phe [KO:K14231]
Desmer_2539  tRNA-Pro [KO:K14232]
Desmer_1133  tRNA-Pro [KO:K14232]
Desmer_4234  tRNA-Pro [KO:K14232]
Desmer_0011  tRNA-Ser [KO:K14233]
Desmer_1565  tRNA-Ser [KO:K14233]
Desmer_0018  tRNA-Ser [KO:K14233]
Desmer_0015  tRNA-Ser [KO:K14233]
Desmer_0116  tRNA-Ser [KO:K14233]
Desmer_2892  tRNA-Ser [KO:K14233]
Desmer_0305  tRNA-Thr [KO:K14234]
Desmer_4227  tRNA-Thr [KO:K14234]
Desmer_0229  tRNA-Thr [KO:K14234]
Desmer_0114  tRNA-Thr [KO:K14234]
Desmer_2894  tRNA-Thr [KO:K14234]
Desmer_1561  tRNA-Trp [KO:K14235]
Desmer_2593  tRNA-Trp [KO:K14235]
Desmer_0108  tRNA-Tyr [KO:K14236]
Desmer_2899  tRNA-Tyr [KO:K14236]
Desmer_3954  tRNA-Val [KO:K14237]
Desmer_0133  tRNA-Val [KO:K14237]
Desmer_0106  tRNA-Val [KO:K14237]
Desmer_0127  tRNA-Val [KO:K14237]
Desmer_1563  tRNA-Val [KO:K14237]
Desmer_0222  glutamyl-tRNA synthetase [KO:K09698] [EC:6.1.1.24]
Desmer_3034  glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit [KO:K02433] [EC:6.3.5.6 6.3.5.7]
Desmer_3033  glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit [KO:K02434] [EC:6.3.5.6 6.3.5.7]
Desmer_3035  glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit [KO:K02435] [EC:6.3.5.6 6.3.5.7]
Desmer_4601  glutaminyl-tRNA synthetase [KO:K01886] [EC:6.1.1.18]
Desmer_0961  alanyl-tRNA synthetase [KO:K01872] [EC:6.1.1.7]
Desmer_0950  aspartyl-tRNA synthetase [KO:K01876] [EC:6.1.1.12]
Desmer_3057  asparaginyl-tRNA synthetase [KO:K01893] [EC:6.1.1.22]
Desmer_3982  glycyl-tRNA synthetase alpha chain [KO:K01878] [EC:6.1.1.14]
Desmer_3981  glycyl-tRNA synthetase beta chain [KO:K01879] [EC:6.1.1.14]
Desmer_0137  threonyl-tRNA synthetase [KO:K01868] [EC:6.1.1.3]
Desmer_0010  seryl-tRNA synthetase [KO:K01875] [EC:6.1.1.11]
Desmer_3883  seryl-tRNA(Sec) selenium transferase [KO:K01042] [EC:2.9.1.1]
Desmer_0224  cysteinyl-tRNA synthetase [KO:K01883] [EC:6.1.1.16]
Desmer_0036  protein containing C-terminal region/beta chain of methionyl-tRNA synthetase [KO:K01874] [EC:6.1.1.10]
Desmer_3779  methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
Desmer_4205  valyl-tRNA synthetase [KO:K01873] [EC:6.1.1.9]
Desmer_4033  leucyl-tRNA synthetase [KO:K01869] [EC:6.1.1.4]
Desmer_0770  Isoleucyl-tRNA synthetase [KO:K01870] [EC:6.1.1.5]
Desmer_3826  Isoleucyl-tRNA synthetase [KO:K01870] [EC:6.1.1.5]
Desmer_0093  lysyl-tRNA synthetase (class II) [KO:K04567] [EC:6.1.1.6]
Desmer_4587  arginyl-tRNA synthetase [KO:K01887] [EC:6.1.1.19]
Desmer_3681  prolyl-tRNA synthetase [KO:K01881] [EC:6.1.1.15]
Desmer_0949  histidyl-tRNA synthetase [KO:K01892] [EC:6.1.1.21]
Desmer_0142  phenylalanyl-tRNA synthetase, alpha subunit [KO:K01889] [EC:6.1.1.20]
Desmer_0143  phenylalanyl-tRNA synthetase, beta subunit [KO:K01890] [EC:6.1.1.20]
Desmer_0151  tyrosyl-tRNA synthetase [KO:K01866] [EC:6.1.1.1]
Desmer_1072  tryptophanyl-tRNA synthetase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
dmi00250  Alanine, aspartate and glutamate metabolism
dmi00260  Glycine, serine and threonine metabolism
dmi00270  Cysteine and methionine metabolism
dmi00290  Valine, leucine and isoleucine biosynthesis
dmi00300  Lysine biosynthesis
dmi00330  Arginine and proline metabolism
dmi00340  Histidine metabolism
dmi00380  Tryptophan metabolism
dmi00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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