KEGG   PATHWAY: dmp00010
Entry
dmp00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Desulfoferula mesophila
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
dmp00010  Glycolysis / Gluconeogenesis
dmp00010

Module
dmp_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:dmp00010]
dmp_M00002  Glycolysis, core module involving three-carbon compounds [PATH:dmp00010]
dmp_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:dmp00010]
dmp_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:dmp00010]
Other DBs
GO: 0006096 0006094
Organism
Desulfoferula mesophila [GN:dmp]
Gene
FAK_16320  glucokinase [KO:K00845] [EC:2.7.1.2]
FAK_24420  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
FAK_13840  pfkA; ATP-dependent 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
FAK_01760  fbp; fructose-1,6-bisphosphatase class 1 [KO:K03841] [EC:3.1.3.11]
FAK_28160  ketose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
FAK_21630  tpi; triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
FAK_05810  glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
FAK_12250  gap-1; glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
FAK_21610  gap-2; glyceraldehyde-3-phosphate dehydrogenase [KO:K00150] [EC:1.2.1.59]
FAK_21620  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
FAK_36520  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
FAK_25830  gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
FAK_13110  phosphoglycerate mutase [KO:K15635] [EC:5.4.2.12]
FAK_25980  apgM; putative 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15635] [EC:5.4.2.12]
FAK_02510  enolase [KO:K01689] [EC:4.2.1.11]
FAK_29590  eno; enolase [KO:K01689] [EC:4.2.1.11]
FAK_23550  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
FAK_26000  ppdK; pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
FAK_07020  phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
FAK_07050  phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
FAK_24210  phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
FAK_01440  phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
FAK_08360  hypothetical protein [KO:K00627] [EC:2.3.1.12]
FAK_08370  acoL; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
FAK_17430  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
FAK_25900  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
FAK_31150  porA; 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha [KO:K00169] [EC:1.2.7.1]
FAK_31160  pyruvate ferredoxin oxidoreductase subunit beta [KO:K00170] [EC:1.2.7.1]
FAK_31130  pyruvate/ketoisovalerate ferredoxin oxidoreductase subunit gamma [KO:K00172] [EC:1.2.7.1]
FAK_17290  hypothetical protein [KO:K00171] [EC:1.2.7.1]
FAK_31140  porD; pyruvate synthase subunit PorD [KO:K00171] [EC:1.2.7.1]
FAK_06830  2-oxoglutarate ferredoxin oxidoreductase subunit alpha [KO:K00174] [EC:1.2.7.3 1.2.7.11]
FAK_16040  2-oxoglutarate ferredoxin oxidoreductase subunit alpha [KO:K00174] [EC:1.2.7.3 1.2.7.11]
FAK_17250  2-oxoglutarate ferredoxin oxidoreductase subunit alpha [KO:K00174] [EC:1.2.7.3 1.2.7.11]
FAK_21980  2-oxoglutarate ferredoxin oxidoreductase subunit alpha [KO:K00174] [EC:1.2.7.3 1.2.7.11]
FAK_23030  vorA; 3-methyl-2-oxobutanoate dehydrogenase subunit VorB [KO:K00174] [EC:1.2.7.3 1.2.7.11]
FAK_25190  3-methyl-2-oxobutanoate dehydrogenase subunit VorB [KO:K00174] [EC:1.2.7.3 1.2.7.11]
FAK_35510  porA; pyruvate ferredoxin oxidoreductase subunit alpha [KO:K00174] [EC:1.2.7.3 1.2.7.11]
FAK_40510  korA; 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [KO:K00174] [EC:1.2.7.3 1.2.7.11]
FAK_06840  2-oxoglutarate ferredoxin oxidoreductase subunit beta [KO:K00175] [EC:1.2.7.3 1.2.7.11]
FAK_16050  2-oxoglutarate ferredoxin oxidoreductase subunit beta [KO:K00175] [EC:1.2.7.3 1.2.7.11]
FAK_17260  2-oxoglutarate synthase [KO:K00175] [EC:1.2.7.3 1.2.7.11]
FAK_21970  2-oxoglutarate synthase [KO:K00175] [EC:1.2.7.3 1.2.7.11]
FAK_23040  vorB; MFS transporter [KO:K00175] [EC:1.2.7.3 1.2.7.11]
FAK_25200  2-oxoglutarate oxidoreductase [KO:K00175] [EC:1.2.7.3 1.2.7.11]
FAK_35500  porB; pyruvate ferredoxin oxidoreductase subunit beta [KO:K00175] [EC:1.2.7.3 1.2.7.11]
FAK_40500  2-oxoglutarate synthase [KO:K00175] [EC:1.2.7.3 1.2.7.11]
FAK_18410  flhA; S-(hydroxymethyl)glutathione dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
FAK_31730  putative zinc-containing alcohol dehydrogenase [KO:K00001] [EC:1.1.1.1]
FAK_12890  acsA; acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
FAK_13130  acsA; acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
FAK_16900  CoA-binding protein [KO:K24012] [EC:6.2.1.13]
FAK_19990  acyl-CoA synthetase [KO:K24012] [EC:6.2.1.13]
FAK_02250  phosphoglucomutase, alpha-D-glucose phosphate-specific [KO:K01835] [EC:5.4.2.2]
FAK_27770  phosphomannomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
FAK_20410  phosphoenolpyruvate carboxykinase [KO:K01596] [EC:4.1.1.32]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
dmp00020  Citrate cycle (TCA cycle)
dmp00030  Pentose phosphate pathway
dmp00500  Starch and sucrose metabolism
dmp00620  Pyruvate metabolism
dmp00640  Propanoate metabolism
dmp00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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