KEGG   PATHWAY: dnp00010
Entry
dnp00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Devosia neptuniae
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
dnp00010  Glycolysis / Gluconeogenesis
dnp00010

Module
dnp_M00002  Glycolysis, core module involving three-carbon compounds [PATH:dnp00010]
dnp_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:dnp00010]
dnp_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:dnp00010]
Other DBs
GO: 0006096 0006094
Organism
Devosia neptuniae [GN:dnp]
Gene
N8A98_17960  ROK family protein [KO:K25026] [EC:2.7.1.2]
N8A98_20650  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
N8A98_23010  class 1 fructose-bisphosphatase [KO:K03841] [EC:3.1.3.11]
N8A98_01220  fructose-1,6-bisphosphatase [KO:K03841] [EC:3.1.3.11]
N8A98_21420  glpX; class II fructose-bisphosphatase [KO:K11532] [EC:3.1.3.11 3.1.3.37]
N8A98_12605  fructose-bisphosphate aldolase class I [KO:K01623] [EC:4.1.2.13]
N8A98_01265  fba; fructose-bisphosphate aldolase class II [KO:K01624] [EC:4.1.2.13]
N8A98_20240  tpiA; triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
N8A98_12640  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
N8A98_12620  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
N8A98_09390  2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
N8A98_20085  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
N8A98_11805  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
N8A98_04220  PEP-utilizing enzyme [KO:K01006] [EC:2.7.9.1]
N8A98_19250  pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
N8A98_19235  pyruvate dehydrogenase complex E1 component subunit beta [KO:K00162] [EC:1.2.4.1]
N8A98_19230  pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase [KO:K00627] [EC:2.3.1.12]
N8A98_13760  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
N8A98_19215  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
N8A98_17690  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
N8A98_06195  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
N8A98_16550  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
N8A98_09205  galactose mutarotase [KO:K01785] [EC:5.1.3.3]
N8A98_01230  galactose mutarotase [KO:K01785] [EC:5.1.3.3]
N8A98_15765  alpha-D-glucose phosphate-specific phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
N8A98_07565  pckA; phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
dnp00020  Citrate cycle (TCA cycle)
dnp00030  Pentose phosphate pathway
dnp00500  Starch and sucrose metabolism
dnp00620  Pyruvate metabolism
dnp00640  Propanoate metabolism
dnp00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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