KEGG   PATHWAY: ecad00030
Entry
ecad00030                   Pathway                                
Name
Pentose phosphate pathway - Erigeron canadensis (horseweed)
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
ecad00030  Pentose phosphate pathway
ecad00030

Module
ecad_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:ecad00030]
ecad_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:ecad00030]
ecad_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:ecad00030]
ecad_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:ecad00030]
Other DBs
GO: 0006098
Organism
Erigeron canadensis (horseweed) [GN:ecad]
Gene
122586708  glucose-6-phosphate isomerase 1, chloroplastic [KO:K01810] [EC:5.3.1.9]
122586990  glucose-6-phosphate isomerase, cytosolic [KO:K01810] [EC:5.3.1.9]
122592288  glucose-6-phosphate 1-dehydrogenase, chloroplastic isoform X1 [KO:K00036] [EC:1.1.1.49 1.1.1.363]
122609884  glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform-like [KO:K00036] [EC:1.1.1.49 1.1.1.363]
122586561  glucose-6-phosphate 1-dehydrogenase, chloroplastic-like [KO:K00036] [EC:1.1.1.49 1.1.1.363]
122588463  glucose-6-phosphate 1-dehydrogenase 6, cytoplasmic-like [KO:K00036] [EC:1.1.1.49 1.1.1.363]
122602924  probable 6-phosphogluconolactonase 4, chloroplastic [KO:K01057] [EC:3.1.1.31]
122581609  probable 6-phosphogluconolactonase 1 [KO:K01057] [EC:3.1.1.31]
122595867  probable 6-phosphogluconolactonase 1 [KO:K01057] [EC:3.1.1.31]
122600081  6-phosphogluconolactonase 3, chloroplastic-like [KO:K01057] [EC:3.1.1.31]
122603122  6-phosphogluconate dehydrogenase, decarboxylating 2 [KO:K00033] [EC:1.1.1.44 1.1.1.343]
122610522  6-phosphogluconate dehydrogenase, decarboxylating 3, chloroplastic [KO:K00033] [EC:1.1.1.44 1.1.1.343]
122578416  ribulose-phosphate 3-epimerase, chloroplastic-like [KO:K01783] [EC:5.1.3.1]
122607248  ribulose-phosphate 3-epimerase, chloroplastic [KO:K01783] [EC:5.1.3.1]
122587111  ribulose-phosphate 3-epimerase, cytoplasmic isoform isoform X1 [KO:K01783] [EC:5.1.3.1]
122579941  transketolase, chloroplastic-like [KO:K00615] [EC:2.2.1.1]
122593721  transketolase, chloroplastic [KO:K00615] [EC:2.2.1.1]
122609962  transaldolase [KO:K00616] [EC:2.2.1.2]
122599363  transaldolase [KO:K00616] [EC:2.2.1.2]
122608351  probable ribose-5-phosphate isomerase 2 [KO:K01807] [EC:5.3.1.6]
122585378  probable ribose-5-phosphate isomerase 2 [KO:K01807] [EC:5.3.1.6]
122586676  probable ribose-5-phosphate isomerase 2 isoform X1 [KO:K01807] [EC:5.3.1.6]
122599862  probable ribose-5-phosphate isomerase 3, chloroplastic [KO:K01807] [EC:5.3.1.6]
122592596  ribokinase [KO:K00852] [EC:2.7.1.15]
122596646  phosphoglucomutase, cytoplasmic [KO:K01835] [EC:5.4.2.2]
122586521  phosphoglucomutase, chloroplastic [KO:K01835] [EC:5.4.2.2]
122578051  ribose-phosphate pyrophosphokinase 1-like [KO:K00948] [EC:2.7.6.1]
122593926  ribose-phosphate pyrophosphokinase 1-like [KO:K00948] [EC:2.7.6.1]
122611353  ribose-phosphate pyrophosphokinase 1 [KO:K00948] [EC:2.7.6.1]
122599003  NADP-dependent glyceraldehyde-3-phosphate dehydrogenase [KO:K00131] [EC:1.2.1.9]
122599992  NADP-dependent glyceraldehyde-3-phosphate dehydrogenase-like [KO:K00131] [EC:1.2.1.9]
122593727  gluconokinase [KO:K00851] [EC:2.7.1.12]
122578126  fructose-bisphosphate aldolase 1, chloroplastic-like [KO:K01623] [EC:4.1.2.13]
122591044  fructose-bisphosphate aldolase, cytoplasmic isozyme 1 isoform X1 [KO:K01623] [EC:4.1.2.13]
122603798  fructose-bisphosphate aldolase 6, cytosolic-like [KO:K01623] [EC:4.1.2.13]
122604060  fructose-bisphosphate aldolase 1, chloroplastic [KO:K01623] [EC:4.1.2.13]
122581093  fructose-bisphosphate aldolase 6, cytosolic [KO:K01623] [EC:4.1.2.13]
122595520  fructose-bisphosphate aldolase 3, chloroplastic [KO:K01623] [EC:4.1.2.13]
122590946  fructose-1,6-bisphosphatase 1, chloroplastic [KO:K03841] [EC:3.1.3.11]
122582064  fructose-1,6-bisphosphatase, chloroplastic-like [KO:K03841] [EC:3.1.3.11]
122611349  fructose-1,6-bisphosphatase, cytosolic [KO:K03841] [EC:3.1.3.11]
122600864  fructose-1,6-bisphosphatase class 1 [KO:K03841] [EC:3.1.3.11]
122578095  ATP-dependent 6-phosphofructokinase 5, chloroplastic [KO:K00850] [EC:2.7.1.11]
122591128  ATP-dependent 6-phosphofructokinase 6-like [KO:K00850] [EC:2.7.1.11]
122593887  ATP-dependent 6-phosphofructokinase 6-like [KO:K00850] [EC:2.7.1.11]
122582091  ATP-dependent 6-phosphofructokinase 2-like [KO:K00850] [EC:2.7.1.11]
122609990  ATP-dependent 6-phosphofructokinase 4, chloroplastic-like [KO:K00850] [EC:2.7.1.11]
122598234  ATP-dependent 6-phosphofructokinase 2-like [KO:K00850] [EC:2.7.1.11]
122599658  ATP-dependent 6-phosphofructokinase 6-like [KO:K00850] [EC:2.7.1.11]
122589885  pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha [KO:K00895] [EC:2.7.1.90]
122605080  pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha-like [KO:K00895] [EC:2.7.1.90]
122595507  pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta-like [KO:K00895] [EC:2.7.1.90]
122601511  pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta-like [KO:K00895] [EC:2.7.1.90]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
ecad00010  Glycolysis / Gluconeogenesis
ecad00040  Pentose and glucuronate interconversions
ecad00052  Galactose metabolism
ecad00230  Purine metabolism
ecad00240  Pyrimidine metabolism
ecad00340  Histidine metabolism
ecad00630  Glyoxylate and dicarboxylate metabolism
ecad00750  Vitamin B6 metabolism
KO pathway
ko00030   
LinkDB

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