KEGG   PATHWAY: eruy00630
Entry
eruy00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Escherichia ruysiae
Class
Metabolism; Carbohydrate metabolism
Pathway map
eruy00630  Glyoxylate and dicarboxylate metabolism
eruy00630

Module
eruy_M00012  Glyoxylate cycle [PATH:eruy00630]
eruy_M00621  Glycine cleavage system [PATH:eruy00630]
Other DBs
GO: 0046487 0043648
Organism
Escherichia ruysiae [GN:eruy]
Gene
OSH18_14410  aceA; isocitrate lyase [KO:K01637] [EC:4.1.3.1]
OSH18_14785  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
OSH18_14405  aceB; malate synthase A [KO:K01638] [EC:2.3.3.9]
OSH18_16720  glcB; malate synthase G [KO:K01638] [EC:2.3.3.9]
OSH18_10290  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
OSH18_06110  gltA; citrate synthase [KO:K01647] [EC:2.3.3.1]
OSH18_01700  acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
OSH18_05860  hydratase [KO:K01681] [EC:4.2.1.3]
OSH18_09040  acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
OSH18_17525  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
OSH18_20170  atoB; acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
OSH18_17215  scpA; methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
OSH18_16700  glcD; glycolate oxidase subunit GlcD [KO:K00104] [EC:1.1.99.14]
OSH18_16705  glcE; glycolate oxidase subunit GlcE [KO:K11472] [EC:1.1.99.14]
OSH18_16710  glcF; glycolate oxidase subunit GlcF [KO:K11473] [EC:1.1.99.14]
OSH18_03385  katE; catalase HPII [KO:K03781] [EC:1.11.1.6]
OSH18_04610  ghrA; glyoxylate/hydroxypyruvate reductase GhrA [KO:K12972] [EC:1.1.1.79 1.1.1.81]
OSH18_11970  ghrB; glyoxylate/hydroxypyruvate reductase GhrB [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
OSH18_11080  gph; phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
OSH18_12275  glnA; glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
OSH18_18805  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
OSH18_17290  gcvP; aminomethyl-transferring glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
OSH18_17280  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
OSH18_09050  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
OSH18_17285  gcvH; glycine cleavage system protein GcvH [KO:K02437]
OSH18_06935  gcl; glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
OSH18_06930  hyi; hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
OSH18_16000  garR; 2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
OSH18_06925  glxR; 2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
OSH18_16005  garK; glycerate 2-kinase [KO:K00865] [EC:2.7.1.165]
OSH18_06905  glxK; glycerate 3-kinase [KO:K00865] [EC:2.7.1.165]
OSH18_16300  ttdA; L(+)-tartrate dehydratase subunit alpha [KO:K03779] [EC:4.2.1.32]
OSH18_16295  ttdB; L(+)-tartrate dehydratase subunit beta [KO:K03780] [EC:4.2.1.32]
OSH18_03690  dmlA; multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
OSH18_03945  kdgA; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
OSH18_12160  fdnG; formate dehydrogenase-N subunit alpha [KO:K00123] [EC:1.17.1.9]
OSH18_12165  fdoH; formate dehydrogenase O subunit beta [KO:K00124]
OSH18_12170  fdoI; formate dehydrogenase cytochrome b556 subunit [KO:K00127]
OSH18_01465  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
eruy00010  Glycolysis / Gluconeogenesis
eruy00020  Citrate cycle (TCA cycle)
eruy00030  Pentose phosphate pathway
eruy00053  Ascorbate and aldarate metabolism
eruy00071  Fatty acid degradation
eruy00230  Purine metabolism
eruy00250  Alanine, aspartate and glutamate metabolism
eruy00260  Glycine, serine and threonine metabolism
eruy00620  Pyruvate metabolism
eruy00710  Carbon fixation by Calvin cycle
eruy00750  Vitamin B6 metabolism
eruy00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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