KEGG   PATHWAY: fam00970
Entry
fam00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Ferriphaselus amnicola
Class
Genetic Information Processing; Translation
Pathway map
fam00970  Aminoacyl-tRNA biosynthesis
fam00970

Organism
Ferriphaselus amnicola [GN:fam]
Gene
OYT1_ch2229  tRNA-Ala [KO:K14218]
OYT1_ch1515  tRNA-Ala [KO:K14218]
OYT1_ch1669  tRNA-Ala [KO:K14218]
OYT1_ch2657  tRNA-Ala [KO:K14218]
OYT1_ch2333  tRNA-Arg [KO:K14219]
OYT1_ch1729  tRNA-Arg [KO:K14219]
OYT1_ch1749  tRNA-Arg [KO:K14219]
OYT1_ch1744  tRNA-Arg [KO:K14219]
OYT1_ch1574  tRNA-Asn [KO:K14220]
OYT1_ch2169  tRNA-Asp [KO:K14221]
OYT1_ch2171  tRNA-Asp [KO:K14221]
OYT1_ch1804  tRNA-Cys [KO:K14222]
OYT1_ch1030  tRNA-Gln [KO:K14223]
OYT1_ch2228  tRNA-Glu [KO:K14224]
OYT1_ch0469  tRNA-Gly [KO:K14225]
OYT1_ch0211  tRNA-Gly [KO:K14225]
OYT1_ch1803  tRNA-Gly [KO:K14225]
OYT1_ch1745  tRNA-His [KO:K14226]
OYT1_ch1516  tRNA-Ile [KO:K14227]
OYT1_ch1670  tRNA-Ile [KO:K14227]
OYT1_ch2658  tRNA-Ile [KO:K14227]
OYT1_ch0929  tRNA-Leu [KO:K14228]
OYT1_ch1223  tRNA-Leu [KO:K14228]
OYT1_ch1851  tRNA-Leu [KO:K14228]
OYT1_ch0793  tRNA-Leu [KO:K14228]
OYT1_ch2157  tRNA-Leu [KO:K14228]
OYT1_ch1426  tRNA-Lys [KO:K14229]
OYT1_ch1518  tRNA-fMet [KO:K14230]
OYT1_ch0157  tRNA-Met [KO:K14230]
OYT1_ch1662  tRNA-Ile [KO:K14230]
OYT1_ch2519  tRNA-Phe [KO:K14231]
OYT1_ch1743  tRNA-Pro [KO:K14232]
OYT1_ch0794  tRNA-Pro [KO:K14232]
OYT1_ch2049  tRNA-Pro [KO:K14232]
OYT1_ch0529  tRNA-Ser [KO:K14233]
OYT1_ch1889  tRNA-Ser [KO:K14233]
OYT1_ch0717  tRNA-Ser [KO:K14233]
OYT1_ch2417  tRNA-Ser [KO:K14233]
OYT1_ch1425  tRNA-Thr [KO:K14234]
OYT1_ch2706  tRNA-Thr [KO:K14234]
OYT1_ch0470  tRNA-Thr [KO:K14234]
OYT1_ch0472  tRNA-Trp [KO:K14235]
OYT1_ch0468  tRNA-Tyr [KO:K14236]
OYT1_ch2409  tRNA-Val [KO:K14237]
OYT1_ch2172  tRNA-Val [KO:K14237]
OYT1_ch2235  tRNA-Val [KO:K14237]
OYT1_ch2245  tRNA-Val [KO:K14237]
OYT1_ch2230  Glutamate--tRNA ligase [KO:K01885] [EC:6.1.1.17]
OYT1_ch2740  Glutamyl-tRNA amidotransferase subunit A [KO:K02433] [EC:6.3.5.6 6.3.5.7]
OYT1_ch2739  Aspartyl/glutamyl-tRNA amidotransferase subunit B [KO:K02434] [EC:6.3.5.6 6.3.5.7]
OYT1_ch2741  Glutamyl-tRNA amidotransferase subunit C [KO:K02435] [EC:6.3.5.6 6.3.5.7]
OYT1_ch2307  Glutamine--tRNA ligase [KO:K01886] [EC:6.1.1.18]
OYT1_ch1850  Alanine--tRNA ligase [KO:K01872] [EC:6.1.1.7]
OYT1_ch1002  Aspartate--tRNA(Asp/Asn) ligase [KO:K01876] [EC:6.1.1.12]
OYT1_ch2389  Glycine--tRNA ligase alpha subunit [KO:K01878] [EC:6.1.1.14]
OYT1_ch2388  Glycine--tRNA ligase beta subunit [KO:K01879] [EC:6.1.1.14]
OYT1_ch1686  Threonine--tRNA ligase [KO:K01868] [EC:6.1.1.3]
OYT1_ch2419  Serine--tRNA ligase [KO:K01875] [EC:6.1.1.11]
OYT1_ch2310  Cysteine--tRNA ligase [KO:K01883] [EC:6.1.1.16]
OYT1_ch0851  Methionine--tRNA ligase [KO:K01874] [EC:6.1.1.10]
OYT1_ch2604  Methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
OYT1_ch2096  Bifunctional polymyxin resistance protein ArnA [KO:K00604] [EC:2.1.2.9]
OYT1_ch0841  Valine--tRNA ligase [KO:K01873] [EC:6.1.1.9]
OYT1_ch0148  Leucine--tRNA ligase [KO:K01869] [EC:6.1.1.4]
OYT1_ch2716  Isoleucine--tRNA ligase [KO:K01870] [EC:6.1.1.5]
OYT1_ch2175  Lysine--tRNA ligase [KO:K04567] [EC:6.1.1.6]
OYT1_ch2734  Arginine--tRNA ligase [KO:K01887] [EC:6.1.1.19]
OYT1_ch1044  Proline--tRNA ligase [KO:K01881] [EC:6.1.1.15]
OYT1_ch0817  Histidine--tRNA ligase [KO:K01892] [EC:6.1.1.21]
OYT1_ch1682  Phenylalanine--tRNA ligase alpha subunit [KO:K01889] [EC:6.1.1.20]
OYT1_ch1681  Phenylalanine--tRNA ligase beta subunit [KO:K01890] [EC:6.1.1.20]
OYT1_ch1050  Tyrosine--tRNA ligase [KO:K01866] [EC:6.1.1.1]
OYT1_ch1836  Tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
fam00250  Alanine, aspartate and glutamate metabolism
fam00260  Glycine, serine and threonine metabolism
fam00270  Cysteine and methionine metabolism
fam00290  Valine, leucine and isoleucine biosynthesis
fam00300  Lysine biosynthesis
fam00330  Arginine and proline metabolism
fam00340  Histidine metabolism
fam00380  Tryptophan metabolism
fam00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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