KEGG   PATHWAY: fap00630
Entry
fap00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Falsirhodobacter algicola
Class
Metabolism; Carbohydrate metabolism
Pathway map
fap00630  Glyoxylate and dicarboxylate metabolism
fap00630

Module
fap_M00621  Glycine cleavage system [PATH:fap00630]
Other DBs
GO: 0046487 0043648
Organism
Falsirhodobacter algicola [GN:fap]
Gene
GR316_00060  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
GR316_04460  malate synthase G [KO:K01638] [EC:2.3.3.9]
GR316_00370  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
GR316_05275  gltA; citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
GR316_03460  acnA; aconitate hydratase AcnA [KO:K27802] [EC:4.2.1.3 4.2.1.99]
GR316_00365  HpcH/HpaI aldolase/citrate lyase family protein [KO:K14451] [EC:3.1.2.30]
GR316_00275  catalase [KO:K03781] [EC:1.11.1.6]
GR316_01600  catalase [KO:K03781] [EC:1.11.1.6]
GR316_10605  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
GR316_12560  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
GR316_00055  HAD-IA family hydrolase [KO:K01091] [EC:3.1.3.18]
GR316_00915  gph; phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
GR316_04105  HAD-IA family hydrolase [KO:K01091] [EC:3.1.3.18]
GR316_03330  aminotransferase class V-fold PLP-dependent enzyme [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
GR316_01295  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
GR316_01930  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
GR316_10590  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
GR316_12280  glnT; type III glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
GR316_10885  aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme [KO:K00600] [EC:2.1.2.1]
GR316_12990  gcvP; aminomethyl-transferring glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
GR316_12215  aminomethyl transferase family protein [KO:K00605] [EC:2.1.2.10]
GR316_12230  DUF1989 domain-containing protein [KO:K00605] [EC:2.1.2.10]
GR316_12980  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
GR316_00410  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
GR316_02600  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
GR316_04125  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
GR316_12985  gcvH; glycine cleavage system protein GcvH [KO:K02437]
GR316_03185  eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
GR316_12250  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
fap00010  Glycolysis / Gluconeogenesis
fap00020  Citrate cycle (TCA cycle)
fap00030  Pentose phosphate pathway
fap00053  Ascorbate and aldarate metabolism
fap00071  Fatty acid degradation
fap00230  Purine metabolism
fap00250  Alanine, aspartate and glutamate metabolism
fap00260  Glycine, serine and threonine metabolism
fap00620  Pyruvate metabolism
fap00710  Carbon fixation by Calvin cycle
fap00750  Vitamin B6 metabolism
fap00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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