KEGG   PATHWAY: fpoa00020
Entry
fpoa00020                   Pathway                                
Name
Citrate cycle (TCA cycle) - Fusarium poae
Description
The citrate cycle (TCA cycle, Krebs cycle) is an important aerobic pathway for the final steps of the oxidation of carbohydrates and fatty acids. The cycle starts with acetyl-CoA, the activated form of acetate, derived from glycolysis and pyruvate oxidation for carbohydrates and from beta oxidation of fatty acids. The two-carbon acetyl group in acetyl-CoA is transferred to the four-carbon compound of oxaloacetate to form the six-carbon compound of citrate. In a series of reactions two carbons in citrate are oxidized to CO2 and the reaction pathway supplies NADH for use in the oxidative phosphorylation and other metabolic processes. The pathway also supplies important precursor metabolites including 2-oxoglutarate. At the end of the cycle the remaining four-carbon part is transformed back to oxaloacetate. According to the genome sequence data, many organisms seem to lack genes for the full cycle [MD:M00009], but contain genes for specific segments [MD:M00010 M00011].
Class
Metabolism; Carbohydrate metabolism
Pathway map
fpoa00020  Citrate cycle (TCA cycle)
fpoa00020

Module
fpoa_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:fpoa00020]
fpoa_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:fpoa00020]
fpoa_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:fpoa00020]
fpoa_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:fpoa00020]
fpoa_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:fpoa00020]
Other DBs
GO: 0006099
Organism
Fusarium poae [GN:fpoa]
Gene
FPOAC1_000181  hypothetical protein [KO:K01647] [EC:2.3.3.1]
FPOAC1_001529  CIT1; citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
FPOAC1_002447  hypothetical protein [KO:K01647] [EC:2.3.3.1]
FPOAC1_009003  hypothetical protein [KO:K01648] [EC:2.3.3.8]
FPOAC1_009004  hypothetical protein [KO:K01648] [EC:2.3.3.8]
FPOAC1_011751  hypothetical protein [KO:K01681] [EC:4.2.1.3]
FPOAC1_003781  hypothetical protein [KO:K01681] [EC:4.2.1.3]
FPOAC1_003546  hypothetical protein [KO:K00031] [EC:1.1.1.42]
FPOAC1_012078  IDH2; NAD-dependent isocitrate dehydrogenase [KO:K00030] [EC:1.1.1.41]
FPOAC1_006768  KGD1; 2-oxoglutarate dehydrogenase E1 component [KO:K00164] [EC:1.2.4.2]
FPOAC1_011772  KGD2; 2-oxoglutarate dehydrogenase complex E2 component [KO:K00658] [EC:2.3.1.61]
FPOAC1_009691  hypothetical protein [KO:K00658] [EC:2.3.1.61]
FPOAC1_011793  LPD1; dihydrolipoamide dehydrogenase precursor [KO:K00382] [EC:1.8.1.4]
FPOAC1_008217  hypothetical protein [KO:K00382] [EC:1.8.1.4]
FPOAC1_011688  hypothetical protein [KO:K01899] [EC:6.2.1.4 6.2.1.5]
FPOAC1_002171  TCA8; Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial [KO:K01899] [EC:6.2.1.4 6.2.1.5]
FPOAC1_011694  hypothetical protein [KO:K01900] [EC:6.2.1.4 6.2.1.5]
FPOAC1_009614  TCA9; Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial [KO:K01900] [EC:6.2.1.4 6.2.1.5]
FPOAC1_011146  SDH1; succinate dehydrogenase flavoprotein subunit [KO:K00234] [EC:1.3.5.1]
FPOAC1_008036  SDH2; succinate dehydrogenase complex, subunit B [KO:K00235] [EC:1.3.5.1]
FPOAC1_002111  hypothetical protein [KO:K00236]
FPOAC1_012783  hypothetical protein [KO:K00236]
FPOAC1_000779  hypothetical protein [KO:K00237]
FPOAC1_004840  hypothetical protein [KO:K01679] [EC:4.2.1.2]
FPOAC1_002577  MDH1; Malate dehydrogenase, cytoplasmic [KO:K00026] [EC:1.1.1.37]
FPOAC1_002627  hypothetical protein [KO:K00026] [EC:1.1.1.37]
FPOAC1_010837  hypothetical protein [KO:K01958] [EC:6.4.1.1]
FPOAC1_004721  ACU6; Phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
FPOAC1_008213  PDA1; alpha subunit of pyruvate dehydrogenase [KO:K00161] [EC:1.2.4.1]
FPOAC1_005132  PDB1; pyruvate dehydrogenase E1, beta subunit [KO:K00162] [EC:1.2.4.1]
FPOAC1_006620  MRP3; Component of pyruvate dehydrogenase complex, mitochondrial [KO:K00627] [EC:2.3.1.12]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00026  2-Oxoglutarate
C00036  Oxaloacetate
C00042  Succinate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00091  Succinyl-CoA
C00122  Fumarate
C00149  (S)-Malate
C00158  Citrate
C00311  Isocitrate
C00417  cis-Aconitate
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C05379  Oxalosuccinate
C05381  3-Carboxy-1-hydroxypropyl-ThPP
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16254  [Dihydrolipoyllysine-residue succinyltransferase] S-succinyldihydrolipoyllysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
fpoa00010  Glycolysis / Gluconeogenesis
fpoa00053  Ascorbate and aldarate metabolism
fpoa00061  Fatty acid biosynthesis
fpoa00062  Fatty acid elongation
fpoa00071  Fatty acid degradation
fpoa00190  Oxidative phosphorylation
fpoa00220  Arginine biosynthesis
fpoa00250  Alanine, aspartate and glutamate metabolism
fpoa00280  Valine, leucine and isoleucine degradation
fpoa00350  Tyrosine metabolism
fpoa00470  D-Amino acid metabolism
fpoa00630  Glyoxylate and dicarboxylate metabolism
KO pathway
ko00020   
LinkDB

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