KEGG   PATHWAY: gab00030
Entry
gab00030                    Pathway                                
Name
Pentose phosphate pathway - Gossypium arboreum (tree cotton)
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
gab00030  Pentose phosphate pathway
gab00030

Module
gab_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:gab00030]
gab_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:gab00030]
gab_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:gab00030]
gab_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:gab00030]
Other DBs
GO: 0006098
Organism
Gossypium arboreum (tree cotton) [GN:gab]
Gene
108483068  glucose-6-phosphate isomerase, cytosolic [KO:K01810] [EC:5.3.1.9]
108489870  glucose-6-phosphate isomerase 1, chloroplastic-like [KO:K01810] [EC:5.3.1.9]
108486643  glucose-6-phosphate isomerase 1, chloroplastic-like [KO:K01810] [EC:5.3.1.9]
108473976  glucose-6-phosphate 1-dehydrogenase 4, chloroplastic [KO:K00036] [EC:1.1.1.49 1.1.1.363]
108483725  glucose-6-phosphate 1-dehydrogenase, chloroplastic-like [KO:K00036] [EC:1.1.1.49 1.1.1.363]
108470637  glucose-6-phosphate 1-dehydrogenase, chloroplastic [KO:K00036] [EC:1.1.1.49 1.1.1.363]
108489820  glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform [KO:K00036] [EC:1.1.1.49 1.1.1.363]
108457256  glucose-6-phosphate 1-dehydrogenase, chloroplastic-like [KO:K00036] [EC:1.1.1.49 1.1.1.363]
108459252  LOW QUALITY PROTEIN: glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform [KO:K00036] [EC:1.1.1.49 1.1.1.363]
108454063  glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform-like [KO:K00036] [EC:1.1.1.49 1.1.1.363]
108476180  probable 6-phosphogluconolactonase 1 [KO:K01057] [EC:3.1.1.31]
108485762  probable 6-phosphogluconolactonase 2 [KO:K01057] [EC:3.1.1.31]
108461203  probable 6-phosphogluconolactonase 1 [KO:K01057] [EC:3.1.1.31]
108457353  probable 6-phosphogluconolactonase 4, chloroplastic isoform X1 [KO:K01057] [EC:3.1.1.31]
108469761  6-phosphogluconate dehydrogenase, decarboxylating 3 [KO:K00033] [EC:1.1.1.44 1.1.1.343]
108454870  6-phosphogluconate dehydrogenase, decarboxylating 1 [KO:K00033] [EC:1.1.1.44 1.1.1.343]
108453269  6-phosphogluconate dehydrogenase, decarboxylating 2, chloroplastic [KO:K00033] [EC:1.1.1.44 1.1.1.343]
108479667  ribulose-phosphate 3-epimerase, chloroplastic-like isoform X1 [KO:K01783] [EC:5.1.3.1]
108486705  ribulose-phosphate 3-epimerase, chloroplastic isoform X1 [KO:K01783] [EC:5.1.3.1]
108468782  ribulose-phosphate 3-epimerase, cytoplasmic isoform-like [KO:K01783] [EC:5.1.3.1]
108450802  transketolase, chloroplastic [KO:K00615] [EC:2.2.1.1]
108460516  transketolase, chloroplastic-like [KO:K00615] [EC:2.2.1.1]
108460654  transketolase, chloroplastic-like [KO:K00615] [EC:2.2.1.1]
108482913  transaldolase-like [KO:K00616] [EC:2.2.1.2]
108454373  transaldolase-like [KO:K00616] [EC:2.2.1.2]
108460687  transaldolase [KO:K00616] [EC:2.2.1.2]
108477146  probable ribose-5-phosphate isomerase 2 isoform X1 [KO:K01807] [EC:5.3.1.6]
108473884  probable ribose-5-phosphate isomerase 3, chloroplastic [KO:K01807] [EC:5.3.1.6]
108469986  probable ribose-5-phosphate isomerase 3, chloroplastic [KO:K01807] [EC:5.3.1.6]
108474820  probable ribose-5-phosphate isomerase 2 [KO:K01807] [EC:5.3.1.6]
108484044  probable ribose-5-phosphate isomerase 4, chloroplastic [KO:K01807] [EC:5.3.1.6]
108463953  probable ribose-5-phosphate isomerase 2 [KO:K01807] [EC:5.3.1.6]
108470181  ribokinase [KO:K00852] [EC:2.7.1.15]
108483399  phosphoglucomutase, cytoplasmic [KO:K01835] [EC:5.4.2.2]
108467064  phosphoglucomutase, cytoplasmic-like isoform X1 [KO:K01835] [EC:5.4.2.2]
108479839  phosphoglucomutase, chloroplastic [KO:K01835] [EC:5.4.2.2]
108475060  ribose-phosphate pyrophosphokinase 2, chloroplastic-like [KO:K00948] [EC:2.7.6.1]
108477167  ribose-phosphate pyrophosphokinase 1 [KO:K00948] [EC:2.7.6.1]
108475144  ribose-phosphate pyrophosphokinase 1-like [KO:K00948] [EC:2.7.6.1]
108467994  ribose-phosphate pyrophosphokinase 1-like [KO:K00948] [EC:2.7.6.1]
108457647  ribose-phosphate pyrophosphokinase 1 [KO:K00948] [EC:2.7.6.1]
108474129  NADP-dependent glyceraldehyde-3-phosphate dehydrogenase [KO:K00131] [EC:1.2.1.9]
108484645  NADP-dependent glyceraldehyde-3-phosphate dehydrogenase [KO:K00131] [EC:1.2.1.9]
108471193  NADP-dependent glyceraldehyde-3-phosphate dehydrogenase-like [KO:K00131] [EC:1.2.1.9]
108466008  thermosensitive gluconokinase [KO:K00851] [EC:2.7.1.12]
108479225  fructose-bisphosphate aldolase 1, chloroplastic-like [KO:K01623] [EC:4.1.2.13]
108466722  fructose-bisphosphate aldolase cytoplasmic isozyme [KO:K01623] [EC:4.1.2.13]
108461375  fructose-bisphosphate aldolase 1, chloroplastic [KO:K01623] [EC:4.1.2.13]
108453781  fructose-bisphosphate aldolase cytoplasmic isozyme-like [KO:K01623] [EC:4.1.2.13]
108460443  fructose-bisphosphate aldolase cytoplasmic isozyme-like [KO:K01623] [EC:4.1.2.13]
108463075  fructose-bisphosphate aldolase, cytoplasmic isozyme 1 [KO:K01623] [EC:4.1.2.13]
108464159  fructose-bisphosphate aldolase 1, chloroplastic-like [KO:K01623] [EC:4.1.2.13]
108453493  probable fructose-bisphosphate aldolase 3, chloroplastic isoform X1 [KO:K01623] [EC:4.1.2.13]
108479315  fructose-1,6-bisphosphatase class 1 [KO:K03841] [EC:3.1.3.11]
108471229  fructose-1,6-bisphosphatase, chloroplastic [KO:K03841] [EC:3.1.3.11]
108487126  fructose-1,6-bisphosphatase, cytosolic isoform X1 [KO:K03841] [EC:3.1.3.11]
108459075  fructose-1,6-bisphosphatase, chloroplastic-like [KO:K03841] [EC:3.1.3.11]
108460779  fructose-1,6-bisphosphatase, cytosolic-like [KO:K03841] [EC:3.1.3.11]
108461510  fructose-1,6-bisphosphatase, cytosolic-like isoform X1 [KO:K03841] [EC:3.1.3.11]
108466449  ATP-dependent 6-phosphofructokinase 4, chloroplastic [KO:K00850] [EC:2.7.1.11]
108485440  ATP-dependent 6-phosphofructokinase 3 isoform X1 [KO:K00850] [EC:2.7.1.11]
108486422  ATP-dependent 6-phosphofructokinase 3-like [KO:K00850] [EC:2.7.1.11]
108486656  ATP-dependent 6-phosphofructokinase 3 [KO:K00850] [EC:2.7.1.11]
108461379  ATP-dependent 6-phosphofructokinase 5, chloroplastic [KO:K00850] [EC:2.7.1.11]
108462462  ATP-dependent 6-phosphofructokinase 3-like [KO:K00850] [EC:2.7.1.11]
108459956  ATP-dependent 6-phosphofructokinase 6-like [KO:K00850] [EC:2.7.1.11]
108453724  ATP-dependent 6-phosphofructokinase 2 [KO:K00850] [EC:2.7.1.11]
108476125  pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha [KO:K00895] [EC:2.7.1.90]
108486362  pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta-like [KO:K00895] [EC:2.7.1.90]
108472945  pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta-like [KO:K00895] [EC:2.7.1.90]
108457798  pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta [KO:K00895] [EC:2.7.1.90]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
gab00010  Glycolysis / Gluconeogenesis
gab00040  Pentose and glucuronate interconversions
gab00052  Galactose metabolism
gab00230  Purine metabolism
gab00240  Pyrimidine metabolism
gab00340  Histidine metabolism
gab00630  Glyoxylate and dicarboxylate metabolism
gab00750  Vitamin B6 metabolism
KO pathway
ko00030   
LinkDB

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