KEGG   PATHWAY: gdi00970
Entry
gdi00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Gluconacetobacter diazotrophicus PA1 5 (Brazil)
Class
Genetic Information Processing; Translation
Pathway map
gdi00970  Aminoacyl-tRNA biosynthesis
gdi00970

Organism
Gluconacetobacter diazotrophicus PA1 5 (Brazil) [GN:gdi]
Gene
GDI0050  gltX; Glutamyl-tRNA synthetase I [KO:K01885] [EC:6.1.1.17]
GDI0196  gatA; putative glutamyl-tRNA(Gln) amidotransferase subunit A [KO:K02433] [EC:6.3.5.6 6.3.5.7]
GDI0589  ileS; putative isoleucyl-tRNA synthetase [KO:K01870] [EC:6.1.1.5]
GDI1448  thrS; Threonyl-tRNA synthetase [KO:K01868] [EC:6.1.1.3]
GDI1763  valS; Valyl-tRNA synthetase [KO:K01873] [EC:6.1.1.9]
GDI1800  metG; Methionyl-tRNA synthetase [KO:K01874] [EC:6.1.1.10]
GDI1855  trpS; putative tryptophanyl-tRNA synthetase [KO:K01867] [EC:6.1.1.2]
GDI1914  hisS; Histidyl-tRNA synthetase [KO:K01892] [EC:6.1.1.21]
GDI1997  gatA; putative glutamyl-tRNA(Gln) amidotransferase subunit A [KO:K02433] [EC:6.3.5.6 6.3.5.7]
GDI2046  lysS; putative Lysyl-tRNA synthetase [KO:K04566] [EC:6.1.1.6]
GDI2128  fmt; Methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
GDI2187  alaS; Alanyl-tRNA synthetase (Alanine--tRNA ligase) (AlaRS) [KO:K01872] [EC:6.1.1.7]
GDI2199  cysS; putative cysteinyl-tRNA synthetase [KO:K01883] [EC:6.1.1.16]
GDI2211  gltX; Glutamyl-tRNA synthetase [KO:K01885] [EC:6.1.1.17]
GDI2219  serS; Seryl-tRNA synthetase [KO:K01875] [EC:6.1.1.11]
GDI2225  argS; Arginyl-tRNA synthetase [KO:K01887] [EC:6.1.1.19]
GDI2232  aspS; Aspartyl-tRNA synthetase [KO:K01876] [EC:6.1.1.12]
GDI2331  glyQ; Glycyl-tRNA synthetase alpha chain [KO:K01878] [EC:6.1.1.14]
GDI2332  glyrs; glycyl-trna synthetase beta chain (glycine--trna ligas beta chain) (glyrs) [KO:K01879] [EC:6.1.1.14]
GDI2375  tyrS; putative tyrosyl-tRNA synthetase [KO:K01866] [EC:6.1.1.1]
GDI2393  leuS; puative leucyl-tRNA synthetase [KO:K01869] [EC:6.1.1.4]
GDI2977  gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit [KO:K02434] [EC:6.3.5.6 6.3.5.7]
GDI2978  gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A [KO:K02433] [EC:6.3.5.6 6.3.5.7]
GDI2979  gatC; Glutamyl-tRNA(Gln) amidotransferase subunit C [KO:K02435] [EC:6.3.5.6 6.3.5.7]
GDI3024  proS; Prolyl-tRNA synthetase [KO:K01881] [EC:6.1.1.15]
GDI3271  pheT; Phenylalanyl-tRNA synthetase beta chain [KO:K01890] [EC:6.1.1.20]
GDI3272  pheS; Phenylalanyl-tRNA synthetase alpha chain [KO:K01889] [EC:6.1.1.20]
tRNA-Ala-1  [KO:K14218]
tRNA-Ala-2  [KO:K14218]
tRNA-Ala-3  [KO:K14218]
tRNA-Ala-4  [KO:K14218]
tRNA-Ala-5  [KO:K14218]
tRNA-Ala-6  [KO:K14218]
tRNA-Arg-1  [KO:K14219]
tRNA-Arg-2  [KO:K14219]
tRNA-Arg-3  [KO:K14219]
tRNA-Asn  [KO:K14220]
tRNA-Asp-1  [KO:K14221]
tRNA-Asp-2  [KO:K14221]
tRNA-Cys  [KO:K14222]
tRNA-Gln-1  [KO:K14223]
tRNA-Gln-2  [KO:K14223]
tRNA-Glu-1  [KO:K14224]
tRNA-Glu-2  [KO:K14224]
tRNA-Gly-1  [KO:K14225]
tRNA-Gly-2  [KO:K14225]
tRNA-Gly-3  [KO:K14225]
tRNA-His  [KO:K14226]
tRNA-Ile-1  [KO:K14227]
tRNA-Ile-2  [KO:K14227]
tRNA-Ile-3  [KO:K14227]
tRNA-Ile-4  [KO:K14227]
tRNA-Leu-1  [KO:K14228]
tRNA-Leu-2  [KO:K14228]
tRNA-Leu-3  [KO:K14228]
tRNA-Leu-4  [KO:K14228]
tRNA-Leu-5  [KO:K14228]
tRNA-Leu-6  [KO:K14228]
tRNA-Lys-1  [KO:K14229]
tRNA-Lys-2  [KO:K14229]
tRNA-Met-1  [KO:K14230]
tRNA-Met-2  [KO:K14230]
tRNA-Met-3  [KO:K14230]
tRNA-Met-4  [KO:K14230]
tRNA-Met-5  [KO:K14230]
tRNA-Met-6  [KO:K14230]
tRNA-Phe  [KO:K14231]
tRNA-Pro-1  [KO:K14232]
tRNA-Pro-2  [KO:K14232]
tRNA-Pro-3  [KO:K14232]
tRNA-Ser-1  [KO:K14233]
tRNA-Ser-2  [KO:K14233]
tRNA-Ser-3  [KO:K14233]
tRNA-Ser-4  [KO:K14233]
tRNA-Thr-1  [KO:K14234]
tRNA-Thr-2  [KO:K14234]
tRNA-Thr-3  [KO:K14234]
tRNA-Trp  [KO:K14235]
tRNA-Tyr  [KO:K14236]
tRNA-Val-1  [KO:K14237]
tRNA-Val-2  [KO:K14237]
tRNA-Val-3  [KO:K14237]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
gdi00250  Alanine, aspartate and glutamate metabolism
gdi00260  Glycine, serine and threonine metabolism
gdi00270  Cysteine and methionine metabolism
gdi00290  Valine, leucine and isoleucine biosynthesis
gdi00300  Lysine biosynthesis
gdi00330  Arginine and proline metabolism
gdi00340  Histidine metabolism
gdi00380  Tryptophan metabolism
gdi00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   

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