KEGG   PATHWAY: gmc00010
Entry
gmc00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Geobacillus sp. Y4.1MC1
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
gmc00010  Glycolysis / Gluconeogenesis
gmc00010

Module
gmc_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:gmc00010]
gmc_M00002  Glycolysis, core module involving three-carbon compounds [PATH:gmc00010]
gmc_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:gmc00010]
gmc_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:gmc00010]
Other DBs
GO: 0006096 0006094
Organism
Geobacillus sp. Y4.1MC1 [GN:gmc]
Gene
GY4MC1_1122  glucokinase, ROK family [KO:K25026] [EC:2.7.1.2]
GY4MC1_0562  Glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
GY4MC1_3102  Glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
GY4MC1_0828  6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
GY4MC1_2539  fructose-1,6-bisphosphatase, class II [KO:K02446] [EC:3.1.3.11]
GY4MC1_3726  fructose-1,6-bisphosphatase, class II [KO:K02446] [EC:3.1.3.11]
GY4MC1_3729  fructose-1,6-bisphosphate aldolase, class II [KO:K01624] [EC:4.1.2.13]
GY4MC1_2169  fructose-1,6-bisphosphate aldolase, class II [KO:K01624] [EC:4.1.2.13]
GY4MC1_2538  fructose-1,6-bisphosphate aldolase, class II [KO:K01624] [EC:4.1.2.13]
GY4MC1_0416  triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
GY4MC1_0414  glyceraldehyde-3-phosphate dehydrogenase, type I [KO:K00134] [EC:1.2.1.12]
GY4MC1_0841  glyceraldehyde-3-phosphate dehydrogenase, type I [KO:K00150] [EC:1.2.1.59]
GY4MC1_0415  Phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
GY4MC1_0417  phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent [KO:K15633] [EC:5.4.2.12]
GY4MC1_0418  enolase [KO:K01689] [EC:4.2.1.11]
GY4MC1_0829  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
GY4MC1_0223  pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [KO:K00161] [EC:1.2.4.1]
GY4MC1_2841  pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [KO:K00161] [EC:1.2.4.1]
GY4MC1_2840  Transketolase central region [KO:K00162] [EC:1.2.4.1]
GY4MC1_0224  Transketolase central region [KO:K00162] [EC:1.2.4.1]
GY4MC1_2429  catalytic domain-containing protein of components of various dehydrogenase complexes [KO:K00627] [EC:2.3.1.12]
GY4MC1_2278  Dihydrolipoyllysine-residue acetyltransferase [KO:K00627] [EC:2.3.1.12]
GY4MC1_2839  catalytic domain-containing protein of components of various dehydrogenase complexes [KO:K00627] [EC:2.3.1.12]
GY4MC1_0222  catalytic domain-containing protein of components of various dehydrogenase complexes [KO:K00627] [EC:2.3.1.12]
GY4MC1_2838  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
GY4MC1_1198  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
GY4MC1_1506  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
GY4MC1_2600  pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [KO:K00174] [EC:1.2.7.3 1.2.7.11]
GY4MC1_2599  pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit [KO:K00175] [EC:1.2.7.3 1.2.7.11]
GY4MC1_3298  L-lactate dehydrogenase [KO:K00016] [EC:1.1.1.27]
GY4MC1_3793  iron-containing alcohol dehydrogenase [KO:K04072] [EC:1.2.1.10 1.1.1.1]
GY4MC1_3092  Alcohol dehydrogenase GroES domain protein [KO:K13953] [EC:1.1.1.1]
GY4MC1_3718  Alcohol dehydrogenase GroES domain protein [KO:K13953] [EC:1.1.1.1]
GY4MC1_2900  Alcohol dehydrogenase GroES domain protein [KO:K13953] [EC:1.1.1.1]
GY4MC1_2949  Aldehyde Dehydrogenase [KO:K00128] [EC:1.2.1.3]
GY4MC1_1491  Aldehyde Dehydrogenase [KO:K00128] [EC:1.2.1.3]
GY4MC1_0254  Aldehyde Dehydrogenase [KO:K00138] [EC:1.2.1.-]
GY4MC1_0798  AMP-dependent synthetase and ligase [KO:K01895] [EC:6.2.1.1]
GY4MC1_0810  AMP-dependent synthetase and ligase [KO:K01895] [EC:6.2.1.1]
GY4MC1_0787  AMP-dependent synthetase and ligase [KO:K01895] [EC:6.2.1.1]
GY4MC1_2262  AMP-dependent synthetase and ligase [KO:K01895] [EC:6.2.1.1]
GY4MC1_2188  Aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
GY4MC1_3235  phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I [KO:K01835] [EC:5.4.2.2]
GY4MC1_1992  phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I [KO:K15778] [EC:5.4.2.8 5.4.2.2]
GY4MC1_0743  phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
GY4MC1_1446  glycoside hydrolase family 1 [KO:K01223] [EC:3.2.1.86]
GY4MC1_0226  6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
GY4MC1_2155  6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
GY4MC1_3776  PTS system, glucose subfamily, IIA subunit [KO:K02777] [EC:2.7.1.-]
GY4MC1_3428  PTS system, glucose subfamily, IIA subunit [KO:K02777] [EC:2.7.1.-]
GY4MC1_2878  PTS system, glucose-specific IIBC subunit [KO:K20118] [EC:2.7.1.199]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
gmc00020  Citrate cycle (TCA cycle)
gmc00030  Pentose phosphate pathway
gmc00500  Starch and sucrose metabolism
gmc00620  Pyruvate metabolism
gmc00640  Propanoate metabolism
gmc00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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