KEGG   PATHWAY: gsd00240
Entry
gsd00240                    Pathway                                
Name
Pyrimidine metabolism - Gulosibacter sediminis
Class
Metabolism; Nucleotide metabolism
Pathway map
gsd00240  Pyrimidine metabolism
gsd00240

Module
gsd_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:gsd00240]
gsd_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:gsd00240]
Other DBs
GO: 0006220 0006213
Organism
Gulosibacter sediminis [GN:gsd]
Gene
M3M28_06800  carB; carbamoyl-phosphate synthase large subunit [KO:K01955] [EC:6.3.5.5]
M3M28_09805  ATP-grasp domain-containing protein [KO:K01955] [EC:6.3.5.5]
M3M28_06805  carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit [KO:K01956] [EC:6.3.5.5]
M3M28_06820  aspartate carbamoyltransferase catalytic subunit [KO:K00609] [EC:2.1.3.2]
M3M28_06815  dihydroorotase [KO:K01465] [EC:3.5.2.3]
M3M28_07310  quinone-dependent dihydroorotate dehydrogenase [KO:K00254] [EC:1.3.5.2]
M3M28_00065  pyrE; orotate phosphoribosyltransferase [KO:K00762] [EC:2.4.2.10]
M3M28_06795  pyrF; orotidine-5'-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23]
M3M28_02755  pyrH; UMP kinase [KO:K09903] [EC:2.7.4.22]
M3M28_09105  ndk; nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
M3M28_10290  Maf-like protein [KO:K06287] [EC:3.6.1.-]
M3M28_08085  CTP synthase [KO:K01937] [EC:6.3.4.2]
M3M28_08040  cmk; (d)CMP kinase [KO:K00945] [EC:2.7.4.25]
M3M28_10705  udk; uridine kinase [KO:K00876] [EC:2.7.1.48]
M3M28_12015  uridine kinase [KO:K00876] [EC:2.7.1.48]
M3M28_08305  bifunctional metallophosphatase/5'-nucleotidase [KO:K01081] [EC:3.1.3.5]
M3M28_01340  5'-nucleotidase C-terminal domain-containing protein [KO:K01081] [EC:3.1.3.5]
M3M28_11355  upp; uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9]
M3M28_06825  pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR [KO:K02825] [EC:2.4.2.9]
M3M28_10400  cytidine deaminase [KO:K01489] [EC:3.5.4.5]
M3M28_11825  dcd; dCTP deaminase [KO:K01494] [EC:3.5.4.13]
M3M28_04145  nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
M3M28_04165  nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
M3M28_07100  dut; dUTP diphosphatase [KO:K01520] [EC:3.6.1.23]
M3M28_10395  thymidine phosphorylase [KO:K00758] [EC:2.4.2.4]
M3M28_10700  thymidine kinase [KO:K00857] [EC:2.7.1.21]
M3M28_05795  thyX; FAD-dependent thymidylate synthase [KO:K03465] [EC:2.1.1.148]
M3M28_11535  hydA; dihydropyrimidinase [KO:K01464] [EC:3.5.2.2]
M3M28_08345  allantoate amidohydrolase [KO:K06016] [EC:3.5.1.6 3.5.1.87]
M3M28_11810  M20 family metallo-hydrolase [KO:K06016] [EC:3.5.1.6 3.5.1.87]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
gsd00030  Pentose phosphate pathway
gsd00220  Arginine biosynthesis
gsd00250  Alanine, aspartate and glutamate metabolism
gsd00280  Valine, leucine and isoleucine degradation
gsd00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

DBGET integrated database retrieval system