KEGG   PATHWAY: gyc00010
Entry
gyc00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Geobacillus sp. Y412MC61
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
gyc00010  Glycolysis / Gluconeogenesis
gyc00010

Module
gyc_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:gyc00010]
gyc_M00002  Glycolysis, core module involving three-carbon compounds [PATH:gyc00010]
gyc_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:gyc00010]
gyc_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:gyc00010]
Other DBs
GO: 0006096 0006094
Organism
Geobacillus sp. Y412MC61 [GN:gyc]
Gene
GYMC61_0195  glucokinase, ROK family [KO:K25026] [EC:2.7.1.2]
GYMC61_3003  phosphoglucose isomerase (PGI) [KO:K01810] [EC:5.3.1.9]
GYMC61_0777  6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
GYMC61_3440  fructose-1,6-bisphosphatase, class II [KO:K02446] [EC:3.1.3.11]
GYMC61_3443  fructose-1,6-bisphosphate aldolase, class II [KO:K01624] [EC:4.1.2.13]
GYMC61_3135  triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
GYMC61_3137  glyceraldehyde-3-phosphate dehydrogenase, type I [KO:K00134] [EC:1.2.1.12]
GYMC61_0790  glyceraldehyde-3-phosphate dehydrogenase, type I [KO:K00150] [EC:1.2.1.59]
GYMC61_3136  Phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
GYMC61_3134  phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent [KO:K15633] [EC:5.4.2.12]
GYMC61_3133  enolase [KO:K01689] [EC:4.2.1.11]
GYMC61_3098  Pyruvate kinase [KO:K00873] [EC:2.7.1.40]
GYMC61_0778  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
GYMC61_1832  pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [KO:K00161] [EC:1.2.4.1]
GYMC61_3319  pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [KO:K00161] [EC:1.2.4.1]
GYMC61_1833  Transketolase central region [KO:K00162] [EC:1.2.4.1]
GYMC61_3318  Transketolase central region [KO:K00162] [EC:1.2.4.1]
GYMC61_3320  catalytic domain of components of various dehydrogenase complexes [KO:K00627] [EC:2.3.1.12]
GYMC61_1519  Dihydrolipoyllysine-residue succinyltransferase [KO:K00627] [EC:2.3.1.12]
GYMC61_1834  catalytic domain of components of various dehydrogenase complexes [KO:K00627] [EC:2.3.1.12]
GYMC61_0264  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
GYMC61_1835  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
GYMC61_2090  pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [KO:K00174] [EC:1.2.7.3 1.2.7.11]
GYMC61_2091  pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit [KO:K00175] [EC:1.2.7.3 1.2.7.11]
GYMC61_1361  L-lactate dehydrogenase [KO:K00016] [EC:1.1.1.27]
GYMC61_0742  Alcohol dehydrogenase zinc-binding domain protein [KO:K00121] [EC:1.1.1.284 1.1.1.1]
GYMC61_2307  Aldehyde Dehydrogenase [KO:K00128] [EC:1.2.1.3]
GYMC61_1054  Aldehyde Dehydrogenase [KO:K00128] [EC:1.2.1.3]
GYMC61_2862  Aldehyde Dehydrogenase [KO:K00128] [EC:1.2.1.3]
GYMC61_3296  Aldehyde dehydrogenase (NAD(+)) [KO:K00138] [EC:1.2.1.-]
GYMC61_0711  AMP-dependent synthetase and ligase [KO:K01895] [EC:6.2.1.1]
GYMC61_0723  AMP-dependent synthetase and ligase [KO:K01895] [EC:6.2.1.1]
GYMC61_0757  AMP-dependent synthetase and ligase [KO:K01895] [EC:6.2.1.1]
GYMC61_2713  Aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
GYMC61_2723  Aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
GYMC61_1388  Glucose-1,6-bisphosphate synthase [KO:K01835] [EC:5.4.2.2]
GYMC61_1242  Phosphomannomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
GYMC61_0658  phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
GYMC61_3310  glycoside hydrolase family 4 [KO:K01222] [EC:3.2.1.86]
GYMC61_3481  glycoside hydrolase family 1 [KO:K01223] [EC:3.2.1.86]
GYMC61_0345  6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
GYMC61_2667  Beta-glucosidase [KO:K01223] [EC:3.2.1.86]
GYMC61_3509  PTS system, glucose subfamily, IIA subunit [KO:K02777] [EC:2.7.1.-]
GYMC61_1785  PTS system, glucose-specific IIBC subunit [KO:K20118] [EC:2.7.1.199]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
gyc00020  Citrate cycle (TCA cycle)
gyc00030  Pentose phosphate pathway
gyc00500  Starch and sucrose metabolism
gyc00620  Pyruvate metabolism
gyc00640  Propanoate metabolism
gyc00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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