KEGG   PATHWAY: gyu00630
Entry
gyu00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Georgenia yuyongxinii
Class
Metabolism; Carbohydrate metabolism
Pathway map
gyu00630  Glyoxylate and dicarboxylate metabolism
gyu00630

Module
gyu_M00012  Glyoxylate cycle [PATH:gyu00630]
gyu_M00621  Glycine cleavage system [PATH:gyu00630]
Other DBs
GO: 0046487 0043648
Organism
Georgenia yuyongxinii [GN:gyu]
Gene
FE374_13925  aceA; isocitrate lyase [KO:K01637] [EC:4.1.3.1]
FE374_02025  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
FE374_03640  malate synthase G [KO:K01638] [EC:2.3.3.9]
FE374_12715  aceB; malate synthase A [KO:K01638] [EC:2.3.3.9]
FE374_13920  aceB; malate synthase A [KO:K01638] [EC:2.3.3.9]
FE374_15225  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
FE374_01930  bifunctional 2-methylcitrate synthase/citrate synthase [KO:K01647] [EC:2.3.3.1]
FE374_03010  citrate synthase [KO:K01647] [EC:2.3.3.1]
FE374_04655  citrate synthase [KO:K01647] [EC:2.3.3.1]
FE374_16605  bifunctional 2-methylcitrate synthase/citrate synthase [KO:K01647] [EC:2.3.3.1]
FE374_08590  acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
FE374_13065  acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
FE374_15075  aconitate hydratase [KO:K01681] [EC:4.2.1.3]
FE374_14370  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
FE374_17055  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
FE374_17380  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
FE374_04785  acyl-CoA carboxylase subunit beta [KO:K01966] [EC:6.4.1.3 2.1.3.15]
FE374_04720  ATP-grasp domain-containing protein [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.3.4.14]
FE374_10675  ATP-grasp domain-containing protein [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.3.4.14]
FE374_07335  catalase [KO:K03781] [EC:1.11.1.6]
FE374_07315  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
FE374_09565  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
FE374_09595  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
FE374_15190  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
FE374_08475  gcvP; aminomethyl-transferring glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
FE374_06420  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
FE374_09640  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
FE374_10555  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
FE374_08470  gcvH; glycine cleavage system protein GcvH [KO:K02437]
FE374_00810  TIM barrel protein [KO:K01816] [EC:5.3.1.22]
FE374_00805  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
FE374_08330  glycerate kinase [KO:K00865] [EC:2.7.1.165]
FE374_17465  glycerate kinase [KO:K00865] [EC:2.7.1.165]
FE374_01265  eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
FE374_13555  multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit [KO:K01616] [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
FE374_15650  formate dehydrogenase [KO:K00123] [EC:1.17.1.9]
FE374_15645  4Fe-4S dicluster domain-containing protein [KO:K00124]
FE374_15200  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
gyu00010  Glycolysis / Gluconeogenesis
gyu00020  Citrate cycle (TCA cycle)
gyu00030  Pentose phosphate pathway
gyu00053  Ascorbate and aldarate metabolism
gyu00071  Fatty acid degradation
gyu00230  Purine metabolism
gyu00250  Alanine, aspartate and glutamate metabolism
gyu00260  Glycine, serine and threonine metabolism
gyu00620  Pyruvate metabolism
gyu00750  Vitamin B6 metabolism
gyu00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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