KEGG   PATHWAY: habn00010
Entry
habn00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Halorhabdus sp. BNX81
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
habn00010  Glycolysis / Gluconeogenesis
habn00010

Module
habn_M00002  Glycolysis, core module involving three-carbon compounds [PATH:habn00010]
habn_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:habn00010]
Other DBs
GO: 0006096 0006094
Organism
Halorhabdus sp. BNX81 [GN:habn]
Gene
HBNXHr_0148  nagC; Transcriptional regulator/sugar kinase [KO:K25026] [EC:2.7.1.2]
HBNXHr_2420  pgi; Glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
HBNXHr_1935  fbaA; Fructose-bisphosphate aldolase, class II [KO:K01624] [EC:4.1.2.13]
HBNXHr_0421  2-amino-3,7-dideoxy-D-threo-hept-6-ulosonic acidsynthase, DhnA-aldolase family [KO:K16306] [EC:4.1.2.13 2.2.1.10]
HBNXHr_0753  tpiA; Triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
HBNXHr_1207  tpiA2; Triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
HBNXHr_1998  gapA; Glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
HBNXHr_1997  pgk; Phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
HBNXHr_0033  gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
HBNXHr_2036  eno; Enolase [KO:K01689] [EC:4.2.1.11]
HBNXHr_0147  pyk; Pyruvate kinase [KO:K00873] [EC:2.7.1.40]
HBNXHr_2683  lpd2; Dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
HBNXHr_0141  porA; Pyruvate:ferredoxin oxidoreductase or related 2-oxoacid:ferredoxin oxidoreductase, alpha subunit [KO:K00169] [EC:1.2.7.1]
HBNXHr_1712  porA3; Pyruvate:ferredoxin oxidoreductase or related 2-oxoacid:ferredoxin oxidoreductase, alpha subunit [KO:K00169] [EC:1.2.7.1]
HBNXHr_0140  porB; Pyruvate:ferredoxin oxidoreductase or related 2-oxoacid:ferredoxin oxidoreductase, beta subunit [KO:K00170] [EC:1.2.7.1]
HBNXHr_1713  porB3; Pyruvate:ferredoxin oxidoreductase or related 2-oxoacid:ferredoxin oxidoreductase, beta subunit [KO:K00170] [EC:1.2.7.1]
HBNXHr_0143  porG; Pyruvate:ferredoxin oxidoreductase or related 2-oxoacid:ferredoxin oxidoreductase, gamma subunit [KO:K00172] [EC:1.2.7.1]
HBNXHr_0142  porD; Pyruvate:ferredoxin oxidoreductase or related 2-oxoacid:ferredoxin oxidoreductase, delta subunit [KO:K00171] [EC:1.2.7.1]
HBNXHr_0707  porA2; Pyruvate:ferredoxin oxidoreductase or related 2-oxoacid:ferredoxin oxidoreductase, alpha subunit [KO:K00174] [EC:1.2.7.3 1.2.7.11]
HBNXHr_0706  porB2; Pyruvate:ferredoxin oxidoreductase or related 2-oxoacid:ferredoxin oxidoreductase, beta subunit [KO:K00175] [EC:1.2.7.3 1.2.7.11]
HBNXHr_1097  ldh; L-lactate dehydrogenase [KO:K00016] [EC:1.1.1.27]
HBNXHr_1715  acs; Acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
HBNXHr_2288  acdA; Acyl-CoA synthetase (NDP forming) [KO:K24012] [EC:6.2.1.13]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
habn00020  Citrate cycle (TCA cycle)
habn00030  Pentose phosphate pathway
habn00500  Starch and sucrose metabolism
habn00620  Pyruvate metabolism
habn00640  Propanoate metabolism
habn00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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