KEGG   PATHWAY: hags00630
Entry
hags00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Halobacterium sp. GSL-19
Class
Metabolism; Carbohydrate metabolism
Pathway map
hags00630  Glyoxylate and dicarboxylate metabolism
hags00630

Module
hags_M00621  Glycine cleavage system [PATH:hags00630]
hags_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:hags00630]
hags_M00968  Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate [PATH:hags00630]
Other DBs
GO: 0046487 0043648
Organism
Halobacterium sp. GSL-19 [GN:hags]
Gene
JT689_03305  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
JT689_05320  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
JT689_11005  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
JT689_09800  citrate synthase [KO:K01647] [EC:2.3.3.1]
JT689_11845  aconitate hydratase [KO:K01681] [EC:4.2.1.3]
JT689_04090  thiolase domain-containing protein [KO:K00626] [EC:2.3.1.9]
JT689_05070  thiolase family protein [KO:K00626] [EC:2.3.1.9]
JT689_03280  mce; methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
JT689_07550  acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.3.4.14]
JT689_07540  acyl-CoA carboxylase subunit beta [KO:K19312] [EC:6.4.1.2 6.4.1.3 2.1.3.15]
JT689_07545  acc operon protein [KO:K22568] [EC:6.4.1.2 6.4.1.3]
JT689_04070  cobalamin B12-binding domain-containing protein [KO:K01849] [EC:5.4.99.2]
JT689_03290  methylmalonyl-CoA mutase family protein [KO:K01848] [EC:5.4.99.2]
JT689_03995  methylmalonyl-CoA mutase family protein [KO:K01848] [EC:5.4.99.2]
JT689_10585  methylaspartate mutase subunit E [KO:K19268] [EC:5.4.99.1]
JT689_10580  mamA; methylaspartate mutase subunit S [KO:K01846] [EC:5.4.99.1]
JT689_10590  methylaspartate ammonia-lyase [KO:K04835] [EC:4.3.1.2]
JT689_08485  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
JT689_07345  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
JT689_04245  phosphoglycolate phosphatase [KO:K22223] [EC:3.1.3.18]
JT689_09755  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
JT689_07085  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
JT689_07805  gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA [KO:K00282] [EC:1.4.4.2]
JT689_07800  gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB [KO:K00283] [EC:1.4.4.2]
JT689_07815  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
JT689_12125  aminomethyltransferase family protein [KO:K00605] [EC:2.1.2.10]
JT689_10310  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
JT689_07810  gcvH; glycine cleavage system protein GcvH [KO:K02437]
JT689_00530  glycerol dehydrogenase [KO:K26209] [EC:1.1.1.-]
JT689_06225  HAD family hydrolase [KO:K26210] [EC:3.1.3.109]
JT689_06220  class II aldolase/adducin family protein [KO:K01636] [EC:4.1.2.-]
JT689_09175  ACT domain-containing protein [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
hags00010  Glycolysis / Gluconeogenesis
hags00020  Citrate cycle (TCA cycle)
hags00030  Pentose phosphate pathway
hags00053  Ascorbate and aldarate metabolism
hags00071  Fatty acid degradation
hags00230  Purine metabolism
hags00250  Alanine, aspartate and glutamate metabolism
hags00260  Glycine, serine and threonine metabolism
hags00620  Pyruvate metabolism
hags00710  Carbon fixation by Calvin cycle
hags00750  Vitamin B6 metabolism
hags00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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