KEGG   PATHWAY: hef00010
Entry
hef00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Helicobacter pylori F16
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
hef00010  Glycolysis / Gluconeogenesis
hef00010

Module
hef_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:hef00010]
Other DBs
GO: 0006096 0006094
Organism
Helicobacter pylori F16 [GN:hef]
Gene
HPF16_1045  glk; glucokinase [KO:K00845] [EC:2.7.1.2]
HPF16_1106  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
HPF16_1445  fbp; fructose-1,6-bisphosphatase [KO:K03841] [EC:3.1.3.11]
HPF16_0184  fba; fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
HPF16_0200  tpiA; triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
HPF16_0900  gap_1; glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
HPF16_0053  gap_2; glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
HPF16_0054  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
HPF16_0957  pgm; phosphoglyceromutase [KO:K15633] [EC:5.4.2.12]
HPF16_0163  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
HPF16_0132  ppsA; phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
HPF16_1053  porA; pyruvate flavodoxin oxidoreductase subunit alpha [KO:K00169] [EC:1.2.7.1]
HPF16_1054  porB; pyruvate ferredoxin oxidoreductase, beta subunit [KO:K00170] [EC:1.2.7.1]
HPF16_1051  porG; pyruvate flavodoxin oxidoreductase subunit gamma [KO:K00172] [EC:1.2.7.1]
HPF16_1052  porD; pyruvate flavodoxin oxidoreductase subunit delta [KO:K00171] [EC:1.2.7.1]
HPF16_0769  oorA; 2-oxoglutarate-acceptor oxidoreductase subunit OorA [KO:K00174] [EC:1.2.7.3 1.2.7.11]
HPF16_0768  oorB; 2-oxoglutarate-acceptor oxidoreductase subunit OorB [KO:K00175] [EC:1.2.7.3 1.2.7.11]
HPF16_1046  NADP-dependent alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
HPF16_0406  acoE; acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
HPF16_1210  algC; phosphomannomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
hef00020  Citrate cycle (TCA cycle)
hef00030  Pentose phosphate pathway
hef00500  Starch and sucrose metabolism
hef00620  Pyruvate metabolism
hef00640  Propanoate metabolism
hef00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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