KEGG   PATHWAY: hmc00240
Entry
hmc00240                    Pathway                                
Name
Pyrimidine metabolism - Hyphomicrobium sp. MC1
Class
Metabolism; Nucleotide metabolism
Pathway map
hmc00240  Pyrimidine metabolism
hmc00240

Module
hmc_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:hmc00240]
Other DBs
GO: 0006220 0006213
Organism
Hyphomicrobium sp. MC1 [GN:hmc]
Gene
HYPMC_2133  carB; carbamoyl phosphate synthase, large subunit [KO:K01955] [EC:6.3.5.5]
HYPMC_2138  carA; carbamoyl phosphate synthetase, glutamine amidotransferase small subunit [KO:K01956] [EC:6.3.5.5]
HYPMC_1131  pyrB; aspartate carbamoyltransferase [KO:K00609] [EC:2.1.3.2]
HYPMC_1130  pyrC; putative dihydroorotase-like protein [KO:K01465] [EC:3.5.2.3]
HYPMC_2969  pyrC; putative dihydroorotase-like protein [KO:K01465] [EC:3.5.2.3]
HYPMC_0815  pyrD; dihydro-orotate oxidase, FMN-linked [KO:K00254] [EC:1.3.5.2]
HYPMC_0570  pyrE; Orotate phosphoribosyltransferase [KO:K00762] [EC:2.4.2.10]
HYPMC_4695  pyrF; orotidine 5'-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23]
HYPMC_2870  pyrH; uridylate kinase [KO:K09903] [EC:2.7.4.22]
HYPMC_4132  ndk; nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
HYPMC_2066  mazG; Nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9]
HYPMC_0665  putative septum formation protein, Maf-like protein [KO:K06287] [EC:3.6.1.-]
HYPMC_4560  Maf-like protein [KO:K06287] [EC:3.6.1.-]
HYPMC_1599  pyrG; CTP synthase (UTP-ammonia ligase) [KO:K01937] [EC:6.3.4.2]
HYPMC_0534  cmk; cytidine monophosphate (CMP) kinase [KO:K00945] [EC:2.7.4.25]
HYPMC_2680  surE; 5'-nucleotidase surE (Nucleoside 5'-monophosphate phosphohydrolase) [KO:K03787] [EC:3.1.3.5 3.1.3.6]
HYPMC_0999  conserved protein of unknown function [KO:K09769] [EC:3.1.4.16]
HYPMC_0032  dcd; 2'-deoxycytidine 5'-triphosphate deaminase [KO:K01494] [EC:3.5.4.13]
HYPMC_4069  Ribonucleoside-diphosphate reductase [KO:K00525] [EC:1.17.4.1]
HYPMC_2785  nrd; ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent, large subunit [KO:K00525] [EC:1.17.4.1]
HYPMC_2972  Metal-dependent phosphohydrolase [KO:K06952] [EC:3.1.3.89]
HYPMC_2029  tmk; thymidylate kinase [KO:K00943] [EC:2.7.4.9]
HYPMC_4747  dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase [KO:K01520] [EC:3.6.1.23]
HYPMC_3891  thyA; thymidylate synthetase [KO:K00560] [EC:2.1.1.45]
HYPMC_4857  N-carbamyl-L-amino acid hydrolase (amidase, hydantoinase/carbamoylase family) [KO:K06016] [EC:3.5.1.6 3.5.1.87]
HYPMC_4780  Putative NADH dehydrogenase/NAD(P)H nitroreductase RutE (Pyrimidine utilization protein E) [KO:K09019] [EC:1.1.1.-]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
hmc00030  Pentose phosphate pathway
hmc00220  Arginine biosynthesis
hmc00250  Alanine, aspartate and glutamate metabolism
hmc00280  Valine, leucine and isoleucine degradation
hmc00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

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