KEGG   PATHWAY: hml00630
Entry
hml00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Haematobacter massiliensis
Class
Metabolism; Carbohydrate metabolism
Pathway map
hml00630  Glyoxylate and dicarboxylate metabolism
hml00630

Module
hml_M00012  Glyoxylate cycle [PATH:hml00630]
hml_M00621  Glycine cleavage system [PATH:hml00630]
hml_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:hml00630]
Other DBs
GO: 0046487 0043648
Organism
Haematobacter massiliensis [GN:hml]
Gene
HmaOT1_12480  isocitrate lyase [KO:K01637] [EC:4.1.3.1 4.1.3.30]
HmaOT1_16420  AMP-dependent synthetase [KO:K01895] [EC:6.2.1.1]
HmaOT1_02980  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
HmaOT1_05275  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
HmaOT1_12485  aceB; malate synthase A [KO:K01638] [EC:2.3.3.9]
HmaOT1_18135  malate synthase G [KO:K01638] [EC:2.3.3.9]
HmaOT1_03950  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
HmaOT1_06015  gltA; citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
HmaOT1_07685  acnA; aconitate hydratase AcnA [KO:K27802] [EC:4.2.1.3 4.2.1.99]
HmaOT1_16120  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
HmaOT1_06095  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
HmaOT1_03435  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
HmaOT1_12215  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
HmaOT1_11660  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
HmaOT1_05835  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
HmaOT1_18720  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
HmaOT1_14915  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
HmaOT1_16825  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
HmaOT1_17805  thiolase domain-containing protein [KO:K00626] [EC:2.3.1.9]
HmaOT1_11665  beta-ketoacyl-ACP reductase [KO:K00023] [EC:1.1.1.36]
HmaOT1_03800  mce; methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
HmaOT1_03960  CoA ester lyase [KO:K14451] [EC:3.1.2.30]
HmaOT1_05465  acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha [KO:K01965] [EC:6.4.1.3]
HmaOT1_05450  acyl-CoA carboxylase subunit beta [KO:K01966] [EC:6.4.1.3 2.1.3.15]
HmaOT1_15180  ATP-grasp domain-containing protein [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
HmaOT1_05475  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
HmaOT1_18130  FAD-binding protein [KO:K00104] [EC:1.1.99.14]
HmaOT1_18125  FAD-binding protein [KO:K11472] [EC:1.1.99.14]
HmaOT1_18120  glcF; glycolate oxidase subunit GlcF [KO:K11473] [EC:1.1.99.14]
HmaOT1_13565  catalase [KO:K03781] [EC:1.11.1.6]
HmaOT1_13375  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
HmaOT1_05145  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
HmaOT1_10400  gph; phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
HmaOT1_06180  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
HmaOT1_10620  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
HmaOT1_11520  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
HmaOT1_10425  form I ribulose bisphosphate carboxylase large subunit [KO:K01601] [EC:4.1.1.39]
HmaOT1_10420  ribulose bisphosphate carboxylase small subunit [KO:K01602] [EC:4.1.1.39]
HmaOT1_09360  alanine--glyoxylate aminotransferase family protein [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
HmaOT1_09520  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
HmaOT1_09530  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
HmaOT1_02180  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
HmaOT1_11600  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
HmaOT1_09980  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
HmaOT1_13060  gcvP; glycine dehydrogenase (aminomethyl-transferring) [KO:K00281] [EC:1.4.4.2]
HmaOT1_13075  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
HmaOT1_06810  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
HmaOT1_03910  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
HmaOT1_02910  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
HmaOT1_13070  gcvH; glycine cleavage system protein GcvH [KO:K02437]
HmaOT1_07130  DUF4147 domain-containing protein [KO:K11529] [EC:2.7.1.165]
HmaOT1_05930  eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
HmaOT1_17915  formate dehydrogenase [KO:K00126] [EC:1.17.1.9]
HmaOT1_17910  formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
HmaOT1_07065  fdnG; formate dehydrogenase-N subunit alpha [KO:K00123] [EC:1.17.1.9]
HmaOT1_07060  fdxH; formate dehydrogenase subunit beta [KO:K00124]
HmaOT1_17905  formate dehydrogenase [KO:K00124]
HmaOT1_07055  formate dehydrogenase subunit gamma [KO:K00127]
HmaOT1_17900  formate dehydrogenase subunit gamma [KO:K00127]
HmaOT1_02445  alpha/beta hydrolase [KO:K01432] [EC:3.5.1.9]
HmaOT1_15265  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
HmaOT1_02725  hutG; N-formylglutamate deformylase [KO:K01458] [EC:3.5.1.68]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
hml00010  Glycolysis / Gluconeogenesis
hml00020  Citrate cycle (TCA cycle)
hml00030  Pentose phosphate pathway
hml00053  Ascorbate and aldarate metabolism
hml00071  Fatty acid degradation
hml00230  Purine metabolism
hml00250  Alanine, aspartate and glutamate metabolism
hml00260  Glycine, serine and threonine metabolism
hml00620  Pyruvate metabolism
hml00710  Carbon fixation by Calvin cycle
hml00750  Vitamin B6 metabolism
hml00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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