KEGG   PATHWAY: hom00970
Entry
hom00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Homoserinibacter sp. YIM 151385
Class
Genetic Information Processing; Translation
Pathway map
hom00970  Aminoacyl-tRNA biosynthesis
hom00970

Organism
Homoserinibacter sp. YIM 151385 [GN:hom]
Gene
OF852_05175  tRNA-Ala [KO:K14218]
OF852_09930  tRNA-Ala [KO:K14218]
OF852_13510  tRNA-Ala [KO:K14218]
OF852_13275  tRNA-Arg [KO:K14219]
OF852_09020  tRNA-Arg [KO:K14219]
OF852_01420  tRNA-Arg [KO:K14219]
OF852_05625  tRNA-Arg [KO:K14219]
OF852_02290  tRNA-Asn [KO:K14220]
OF852_11565  tRNA-Asp [KO:K14221]
OF852_03710  tRNA-Cys [KO:K14222]
OF852_06650  tRNA-Gln [KO:K14223]
OF852_13950  tRNA-Gln [KO:K14223]
OF852_06615  tRNA-Glu [KO:K14224]
OF852_11570  tRNA-Glu [KO:K14224]
OF852_05445  tRNA-Gly [KO:K14225]
OF852_03715  tRNA-Gly [KO:K14225]
OF852_10255  tRNA-Gly [KO:K14225]
OF852_05655  tRNA-His [KO:K14226]
OF852_09935  tRNA-Ile [KO:K14227]
OF852_02930  tRNA-Leu [KO:K14228]
OF852_03300  tRNA-Leu [KO:K14228]
OF852_00995  tRNA-Leu [KO:K14228]
OF852_09835  tRNA-Leu [KO:K14228]
OF852_00255  tRNA-Leu [KO:K14228]
OF852_13035  tRNA-Lys [KO:K14229]
OF852_07045  tRNA-Lys [KO:K14229]
OF852_08495  tRNA-Met [KO:K14230]
OF852_02355  tRNA-Ile [KO:K14230]
OF852_00825  tRNA-Met [KO:K14230]
OF852_11560  tRNA-Phe [KO:K14231]
OF852_05440  tRNA-Pro [KO:K14232]
OF852_04375  tRNA-Pro [KO:K14232]
OF852_07975  tRNA-Pro [KO:K14232]
OF852_08085  tRNA-Ser [KO:K14233]
OF852_09260  tRNA-Ser [KO:K14233]
OF852_11740  tRNA-Ser [KO:K14233]
OF852_09240  tRNA-Ser [KO:K14233]
OF852_07895  tRNA-Thr [KO:K14234]
OF852_08500  tRNA-Thr [KO:K14234]
OF852_13155  tRNA-Thr [KO:K14234]
OF852_08390  tRNA-Trp [KO:K14235]
OF852_08575  tRNA-Tyr [KO:K14236]
OF852_03720  tRNA-Val [KO:K14237]
OF852_03705  tRNA-Val [KO:K14237]
OF852_02425  tRNA-Val [KO:K14237]
OF852_06735  gltX; glutamate--tRNA ligase [KO:K01885] [EC:6.1.1.17]
OF852_05995  gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA [KO:K02433] [EC:6.3.5.6 6.3.5.7]
OF852_05965  gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB [KO:K02434] [EC:6.3.5.6 6.3.5.7]
OF852_06000  gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC [KO:K02435] [EC:6.3.5.6 6.3.5.7]
OF852_13645  metal-dependent hydrolase [KO:K01872] [EC:6.1.1.7]
OF852_03530  alaS; alanine--tRNA ligase [KO:K01872] [EC:6.1.1.7]
OF852_02220  glycine--tRNA ligase [KO:K01880] [EC:6.1.1.14]
OF852_03700  thrS; threonine--tRNA ligase [KO:K01868] [EC:6.1.1.3]
OF852_09270  serS; serine--tRNA ligase [KO:K01875] [EC:6.1.1.11]
OF852_13130  cysS; cysteine--tRNA ligase [KO:K01883] [EC:6.1.1.16]
OF852_13895  metG; methionine--tRNA ligase [KO:K01874] [EC:6.1.1.10]
OF852_03405  fmt; methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
OF852_05325  valS; valine--tRNA ligase [KO:K01873] [EC:6.1.1.9]
OF852_05040  leuS; leucine--tRNA ligase [KO:K01869] [EC:6.1.1.4]
OF852_05280  ileS; isoleucine--tRNA ligase [KO:K01870] [EC:6.1.1.5]
OF852_11660  lysS; lysine--tRNA ligase [KO:K04567] [EC:6.1.1.6]
OF852_01435  argS; arginine--tRNA ligase [KO:K01887] [EC:6.1.1.19]
OF852_01725  proline--tRNA ligase [KO:K01881] [EC:6.1.1.15]
OF852_04635  pheS; phenylalanine--tRNA ligase subunit alpha [KO:K01889] [EC:6.1.1.20]
OF852_04630  pheT; phenylalanine--tRNA ligase subunit beta [KO:K01890] [EC:6.1.1.20]
OF852_04570  tyrS; tyrosine--tRNA ligase [KO:K01866] [EC:6.1.1.1]
OF852_07755  trpS; tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
hom00250  Alanine, aspartate and glutamate metabolism
hom00260  Glycine, serine and threonine metabolism
hom00270  Cysteine and methionine metabolism
hom00290  Valine, leucine and isoleucine biosynthesis
hom00300  Lysine biosynthesis
hom00330  Arginine and proline metabolism
hom00340  Histidine metabolism
hom00380  Tryptophan metabolism
hom00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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