KEGG   PATHWAY: hpar00970
Entry
hpar00970                   Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Hafnia paralvei
Class
Genetic Information Processing; Translation
Pathway map
hpar00970  Aminoacyl-tRNA biosynthesis
hpar00970

Organism
Hafnia paralvei [GN:hpar]
Gene
AL518_18255  tRNA-Ala [KO:K14218]
AL518_00555  tRNA-Ala [KO:K14218]
AL518_04030  tRNA-Ala [KO:K14218]
AL518_04915  tRNA-Ala [KO:K14218]
AL518_11065  tRNA-Arg [KO:K14219]
AL518_03850  tRNA-Arg [KO:K14219]
AL518_00685  tRNA-Arg [KO:K14219]
AL518_00690  tRNA-Arg [KO:K14219]
AL518_00695  tRNA-Arg [KO:K14219]
AL518_00700  tRNA-Arg [KO:K14219]
AL518_19450  tRNA-Arg [KO:K14219]
AL518_12480  tRNA-Asn [KO:K14220]
AL518_12705  tRNA-Asn [KO:K14220]
AL518_12710  tRNA-Asn [KO:K14220]
AL518_12715  tRNA-Asn [KO:K14220]
AL518_00505  tRNA-Asp [KO:K14221]
AL518_00540  tRNA-Asp [KO:K14221]
AL518_04015  tRNA-Asp [KO:K14221]
AL518_16890  tRNA-Cys [KO:K14222]
AL518_19055  tRNA-Gln [KO:K14223]
AL518_19040  tRNA-Gln [KO:K14223]
AL518_19045  tRNA-Gln [KO:K14223]
AL518_19060  tRNA-Gln [KO:K14223]
AL518_03260  tRNA-Glu [KO:K14224]
AL518_03445  tRNA-Glu [KO:K14224]
AL518_04890  tRNA-Glu [KO:K14224]
AL518_06465  tRNA-Glu [KO:K14224]
AL518_07945  tRNA-Glu [KO:K14224]
AL518_01090  tRNA-Gly [KO:K14225]
AL518_02310  tRNA-Gly [KO:K14225]
AL518_02315  tRNA-Gly [KO:K14225]
AL518_02320  tRNA-Gly [KO:K14225]
AL518_16895  tRNA-Gly [KO:K14225]
AL518_03395  tRNA-Gly [KO:K14225]
AL518_03845  tRNA-His [KO:K14226]
AL518_00560  tRNA-Ile [KO:K14227]
AL518_04035  tRNA-Ile [KO:K14227]
AL518_04910  tRNA-Ile [KO:K14227]
AL518_02000  tRNA-Leu [KO:K14228]
AL518_16885  tRNA-Leu [KO:K14228]
AL518_19035  tRNA-Leu [KO:K14228]
AL518_07130  tRNA-Leu [KO:K14228]
AL518_01540  tRNA-Leu [KO:K14228]
AL518_01545  tRNA-Leu [KO:K14228]
AL518_01550  tRNA-Leu [KO:K14228]
AL518_03840  tRNA-Leu [KO:K14228]
AL518_18300  tRNA-Lys [KO:K14229]
AL518_16925  tRNA-Lys [KO:K14229]
AL518_18725  tRNA-Lys [KO:K14229]
AL518_18730  tRNA-Lys [KO:K14229]
AL518_18735  tRNA-Lys [KO:K14229]
AL518_18740  tRNA-Lys [KO:K14229]
AL518_19030  tRNA-Met [KO:K14230]
AL518_08835  tRNA-Met [KO:K14230]
AL518_01720  tRNA-Met [KO:K14230]
AL518_01995  tRNA-Met [KO:K14230]
AL518_08840  tRNA-Met [KO:K14230]
AL518_08845  tRNA-Met [KO:K14230]
AL518_19050  tRNA-Met [KO:K14230]
AL518_02585  tRNA-Phe [KO:K14231]
AL518_02850  tRNA-Phe [KO:K14231]
AL518_12185  tRNA-Pro [KO:K14232]
AL518_03830  tRNA-Pro [KO:K14232]
AL518_03835  tRNA-Pro [KO:K14232]
AL518_00705  tRNA-Ser [KO:K14233]
AL518_15475  tRNA-Ser [KO:K14233]
AL518_17105  tRNA-Ser [KO:K14233]
AL518_16125  tRNA-Ser [KO:K14233]
AL518_16135  tRNA-Ser [KO:K14233]
AL518_03405  tRNA-Thr [KO:K14234]
AL518_03245  tRNA-Thr [KO:K14234]
AL518_15470  tRNA-Thr [KO:K14234]
AL518_09275  tRNA-Thr [KO:K14234]
AL518_03390  tRNA-Thr [KO:K14234]
AL518_04010  tRNA-Trp [KO:K14235]
AL518_03400  tRNA-Tyr [KO:K14236]
AL518_13530  tRNA-Tyr [KO:K14236]
AL518_13540  tRNA-Tyr [KO:K14236]
AL518_18275  tRNA-Val [KO:K14237]
AL518_13835  tRNA-Val [KO:K14237]
AL518_13840  tRNA-Val [KO:K14237]
AL518_13845  tRNA-Val [KO:K14237]
AL518_18280  tRNA-Val [KO:K14237]
AL518_18285  tRNA-Val [KO:K14237]
AL518_18290  tRNA-Val [KO:K14237]
AL518_18295  tRNA-Val [KO:K14237]
AL518_05395  tRNA-Sec [KO:K14238]
AL518_18270  glutamate--tRNA ligase [KO:K01885] [EC:6.1.1.17]
AL518_18995  glutamine--tRNA ligase [KO:K01886] [EC:6.1.1.18]
AL518_00715  alanine--tRNA ligase [KO:K01872] [EC:6.1.1.7]
AL518_16015  aspartate--tRNA ligase [KO:K01876] [EC:6.1.1.12]
AL518_17265  asparagine--tRNA ligase [KO:K01893] [EC:6.1.1.22]
AL518_04545  glyQ; glycine--tRNA ligase subunit alpha [KO:K01878] [EC:6.1.1.14]
AL518_04550  glycine--tRNA ligase subunit beta [KO:K01879] [EC:6.1.1.14]
AL518_15270  threonine--tRNA ligase [KO:K01868] [EC:6.1.1.3]
AL518_17480  serine--tRNA ligase [KO:K01875] [EC:6.1.1.11]
AL518_07590  DgaE family pyridoxal phosphate-dependent ammonia lyase [KO:K01042] [EC:2.9.1.1]
AL518_19470  cysS; cysteine--tRNA ligase [KO:K01883] [EC:6.1.1.16]
AL518_12360  metG; methionine--tRNA ligase [KO:K01874] [EC:6.1.1.10]
AL518_06415  methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
AL518_07090  valine--tRNA ligase [KO:K01873] [EC:6.1.1.9]
AL518_19135  leuS; leucine--tRNA ligase [KO:K01869] [EC:6.1.1.4]
AL518_08125  isoleucine--tRNA ligase [KO:K01870] [EC:6.1.1.5]
AL518_01095  lysS; lysine--tRNA ligase [KO:K04567] [EC:6.1.1.6]
AL518_16060  arginine--tRNA ligase [KO:K01887] [EC:6.1.1.19]
AL518_07905  proS; proline--tRNA ligase [KO:K01881] [EC:6.1.1.15]
AL518_00205  histidine--tRNA ligase [KO:K01892] [EC:6.1.1.21]
AL518_15245  phenylalanine--tRNA ligase subunit alpha [KO:K01889] [EC:6.1.1.20]
AL518_15240  phenylalanine--tRNA ligase subunit beta [KO:K01890] [EC:6.1.1.20]
AL518_14535  tyrosine--tRNA ligase [KO:K01866] [EC:6.1.1.1]
AL518_06010  trpS; tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
AL518_11750  trpS; tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
hpar00250  Alanine, aspartate and glutamate metabolism
hpar00260  Glycine, serine and threonine metabolism
hpar00270  Cysteine and methionine metabolism
hpar00290  Valine, leucine and isoleucine biosynthesis
hpar00300  Lysine biosynthesis
hpar00330  Arginine and proline metabolism
hpar00340  Histidine metabolism
hpar00380  Tryptophan metabolism
hpar00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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