KEGG   PATHWAY: hyn02020
Entry
hyn02020                    Pathway                                
Name
Two-component system - Hydrogenophaga sp. BPS33
Description
Two-component signal transduction systems enable bacteria to sense, respond, and adapt to changes in their environment or in their intracellular state. Each two-component system consists of a sensor protein-histidine kinase (HK) and a response regulator (RR). In the prototypical two-component pathway, the sensor HK phosphorylates its own conserved His residue in response to a signal(s) in the environment. Subsequently, the phosphoryl group of HK is transferred onto a specific Asp residue on the RR. The activated RR can then effect changes in cellular physiology, often by regulating gene expression. Two-component pathways thus often enable cells to sense and respond to stimuli by inducing changes in transcription.
Class
Environmental Information Processing; Signal transduction
Pathway map
hyn02020  Two-component system
hyn02020

Other DBs
GO: 0000160
Organism
Hydrogenophaga sp. BPS33 [GN:hyn]
Gene
F9K07_16365  phoR; phosphate regulon sensor histidine kinase PhoR [KO:K07636] [EC:2.7.13.3]
F9K07_16370  phoB; phosphate regulon transcriptional regulatory protein PhoB [KO:K07657]
F9K07_17935  response regulator [KO:K07657]
F9K07_16395  pstS; phosphate ABC transporter substrate-binding protein PstS [KO:K02040]
F9K07_12865  HAMP domain-containing protein [KO:K07638] [EC:2.7.13.3]
F9K07_12870  ompR; two-component system response regulator OmpR [KO:K07659]
F9K07_09545  DegQ family serine endoprotease [KO:K04771] [EC:3.4.21.107]
F9K07_23575  Do family serine endopeptidase [KO:K04771] [EC:3.4.21.107]
F9K07_15680  PDZ domain-containing protein [KO:K04771] [EC:3.4.21.107]
F9K07_15095  PDZ domain-containing protein [KO:K04771] [EC:3.4.21.107]
F9K07_20375  creC; two-component system sensor histidine kinase CreC [KO:K07641] [EC:2.7.13.3]
F9K07_20380  creB; two-component system response regulator CreB [KO:K07663]
F9K07_18290  HAMP domain-containing protein [KO:K07642] [EC:2.7.13.3]
F9K07_18295  response regulator [KO:K07664]
F9K07_14275  efflux RND transporter periplasmic adaptor subunit [KO:K07799]
F9K07_14265  acriflavine resistance protein B [KO:K07789]
F9K07_06965  heavy metal sensor histidine kinase [KO:K07644] [EC:2.7.13.3]
F9K07_29540  heavy metal sensor histidine kinase [KO:K07644] [EC:2.7.13.3]
F9K07_29820  heavy metal sensor histidine kinase [KO:K07644] [EC:2.7.13.3]
F9K07_29850  heavy metal sensor histidine kinase [KO:K07644] [EC:2.7.13.3]
F9K07_29545  response regulator [KO:K07665]
F9K07_29815  response regulator [KO:K07665]
F9K07_29900  response regulator [KO:K07665]
F9K07_06970  response regulator [KO:K07665]
F9K07_29845  response regulator [KO:K07665]
F9K07_29480  copper-binding protein [KO:K07810]
F9K07_29565  copper-binding protein [KO:K07810]
F9K07_29485  efflux RND transporter permease subunit [KO:K07787]
F9K07_15190  HAMP domain-containing protein [KO:K07645] [EC:2.7.13.3]
F9K07_15195  response regulator [KO:K07666]
F9K07_25930  flhD; flagellar transcriptional regulator FlhD [KO:K02403]
F9K07_25925  flhC; flagellar transcriptional regulator FlhC [KO:K02402]
F9K07_25935  flagellin [KO:K02406]
F9K07_25945  flagellin [KO:K02406]
F9K07_25950  flagellin [KO:K02406]
F9K07_25955  flagellin [KO:K02406]
F9K07_25880  RNA polymerase sigma factor FliA [KO:K02405]
F9K07_25920  motA; flagellar motor stator protein MotA [KO:K02556]
F9K07_09120  DUF4118 domain-containing protein [KO:K07646] [EC:2.7.13.3]
F9K07_09115  kdpE; two-component system response regulator KdpE [KO:K07667]
F9K07_09135  kdpA; potassium-transporting ATPase subunit KdpA [KO:K01546]
F9K07_09130  kdpB; potassium-transporting ATPase subunit KdpB [KO:K01547] [EC:7.2.2.6]
F9K07_09125  kdpC; potassium-transporting ATPase subunit KdpC [KO:K01548]
F9K07_05450  sensor histidine kinase [KO:K07649] [EC:2.7.13.3]
F9K07_18820  sensor histidine kinase [KO:K07649] [EC:2.7.13.3]
F9K07_18815  response regulator transcription factor [KO:K07774]
F9K07_18800  tripartite tricarboxylate transporter permease [KO:K07793]
F9K07_17810  transporter [KO:K07793]
F9K07_14860  tripartite tricarboxylate transporter permease [KO:K07793]
F9K07_08700  tripartite tricarboxylate transporter permease [KO:K07793]
F9K07_21795  tripartite tricarboxylate transporter permease [KO:K07793]
F9K07_26715  tripartite tricarboxylate transporter permease [KO:K07793]
F9K07_18675  tripartite tricarboxylate transporter permease [KO:K07793]
F9K07_18805  tripartite tricarboxylate transporter TctB family protein [KO:K07794]
F9K07_21790  tripartite tricarboxylate transporter TctB family protein [KO:K07794]
F9K07_14855  tripartite tricarboxylate transporter TctB family protein [KO:K07794]
F9K07_18670  tripartite tricarboxylate transporter TctB family protein [KO:K07794]
F9K07_17805  hypothetical protein [KO:K07794]
F9K07_13060  tripartite tricarboxylate transporter substrate binding protein [KO:K07795]
F9K07_18810  tripartite tricarboxylate transporter substrate binding protein [KO:K07795]
F9K07_17795  tripartite tricarboxylate transporter substrate binding protein [KO:K07795]
F9K07_23600  heme A synthase [KO:K02259] [EC:1.17.99.9]
F9K07_00005  dnaA; chromosomal replication initiator protein DnaA [KO:K02313]
F9K07_01145  mprF; bifunctional lysylphosphatidylglycerol flippase/synthetase MprF [KO:K14205] [EC:2.3.2.3]
F9K07_09700  CoA ester lyase [KO:K01644] [EC:4.1.3.34]
F9K07_24610  CoA ester lyase [KO:K01644] [EC:4.1.3.34]
F9K07_24700  CoA ester lyase [KO:K01644] [EC:4.1.3.34]
F9K07_22410  sensor histidine kinase [KO:K08082] [EC:2.7.13.3]
F9K07_22405  response regulator transcription factor [KO:K08083]
F9K07_14865  HAMP domain-containing protein [KO:K07673] [EC:2.7.13.3]
F9K07_14870  response regulator [KO:K07684]
F9K07_14885  nitrate reductase subunit alpha [KO:K00370] [EC:1.7.5.1 1.7.99.-]
F9K07_14890  narH; nitrate reductase subunit beta [KO:K00371] [EC:1.7.5.1 1.7.99.-]
F9K07_14900  narI; respiratory nitrate reductase subunit gamma [KO:K00374] [EC:1.7.5.1 1.7.99.-]
F9K07_14895  narJ; nitrate reductase molybdenum cofactor assembly chaperone [KO:K00373]
F9K07_15635  PAS domain S-box protein [KO:K07675] [EC:2.7.13.3]
F9K07_03340  response regulator transcription factor [KO:K07689]
F9K07_12505  response regulator transcription factor [KO:K07689]
F9K07_26255  response regulator transcription factor [KO:K07689]
F9K07_20920  spore coat protein U domain-containing protein [KO:K27078]
F9K07_20905  hypothetical protein [KO:K27078]
F9K07_20910  molecular chaperone [KO:K07346]
F9K07_20915  fimbrial biogenesis outer membrane usher protein [KO:K07347]
F9K07_16810  Flp family type IVb pilin [KO:K02651]
F9K07_16820  cpaB; Flp pilus assembly protein CpaB [KO:K02279]
F9K07_16825  type II and III secretion system protein family protein [KO:K02280]
F9K07_16830  histidine kinase [KO:K02282]
F9K07_16835  CpaF family protein [KO:K02283] [EC:7.4.2.8]
F9K07_30735  CpaF family protein [KO:K02283] [EC:7.4.2.8]
F9K07_16840  secretion system protein [KO:K12510]
F9K07_16845  type II secretion system F family protein [KO:K12511]
F9K07_16850  pilus assembly protein [KO:K27079]
F9K07_16870  hypothetical protein [KO:K27080]
F9K07_14480  [protein-PII] uridylyltransferase [KO:K00990] [EC:2.7.7.59]
F9K07_16210  P-II family nitrogen regulator [KO:K04751]
F9K07_19750  PAS domain-containing sensor histidine kinase [KO:K07708] [EC:2.7.13.3]
F9K07_19745  ntrC; nitrogen regulation protein NR(I) [KO:K07712]
F9K07_13630  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
F9K07_01075  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
F9K07_01115  type III glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
F9K07_31170  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
F9K07_31315  hypothetical protein [KO:K01915] [EC:6.3.1.2]
F9K07_19760  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
F9K07_24750  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
F9K07_26810  HAMP domain-containing protein [KO:K13598] [EC:2.7.13.3]
F9K07_26805  response regulator [KO:K13599]
F9K07_11075  sigma-54-dependent Fis family transcriptional regulator [KO:K07714]
F9K07_02645  thiolase family protein [KO:K00626] [EC:2.3.1.9]
F9K07_12110  thiolase family protein [KO:K00626] [EC:2.3.1.9]
F9K07_24720  thiolase domain-containing protein [KO:K00626] [EC:2.3.1.9]
F9K07_14675  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
F9K07_06790  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
F9K07_21670  thiolase domain-containing protein [KO:K00626] [EC:2.3.1.9]
F9K07_10765  acetyl-CoA C-acyltransferase family protein [KO:K00626] [EC:2.3.1.9]
F9K07_04845  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
F9K07_26065  thiolase domain-containing protein [KO:K00626] [EC:2.3.1.9]
F9K07_03920  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
F9K07_08235  acetyl-CoA C-acyltransferase family protein [KO:K00626] [EC:2.3.1.9]
F9K07_02990  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
F9K07_03150  hypothetical protein [KO:K00626] [EC:2.3.1.9]
F9K07_13555  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
F9K07_13670  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
F9K07_22105  thiolase domain-containing protein [KO:K00626] [EC:2.3.1.9]
F9K07_22225  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
F9K07_24215  HAMP domain-containing histidine kinase [KO:K02668] [EC:2.7.13.3]
F9K07_24220  sigma-54-dependent Fis family transcriptional regulator [KO:K02667]
F9K07_11105  rpoN; RNA polymerase factor sigma-54 [KO:K03092]
F9K07_27090  rpoN; RNA polymerase factor sigma-54 [KO:K03092]
F9K07_28915  pilin [KO:K02650]
F9K07_24095  HAMP domain-containing protein [KO:K07711] [EC:2.7.13.3]
F9K07_24105  response regulator [KO:K07715]
F9K07_26280  methyltransferase domain-containing protein [KO:K00575] [EC:2.1.1.80]
F9K07_17485  HAMP domain-containing protein [KO:K03406]
F9K07_29220  HAMP domain-containing protein [KO:K03406]
F9K07_06305  methyl-accepting chemotaxis protein [KO:K03406]
F9K07_29225  HAMP domain-containing protein [KO:K03406]
F9K07_19545  HAMP domain-containing protein [KO:K03406]
F9K07_12495  PAS domain-containing protein [KO:K03776]
F9K07_29230  chemotaxis protein CheW [KO:K03408]
F9K07_17480  chemotaxis protein CheW [KO:K03408]
F9K07_26275  chemotaxis protein CheA [KO:K03407] [EC:2.7.13.3]
F9K07_25910  cheY; chemotaxis protein CheY [KO:K03413]
F9K07_26270  response regulator [KO:K03413]
F9K07_26290  chemotaxis response regulator protein-glutamate methylesterase [KO:K03412] [EC:3.1.1.61 3.5.1.44]
F9K07_23925  methyl-accepting chemotaxis protein [KO:K02660]
F9K07_23930  chemotaxis protein CheW [KO:K02659]
F9K07_23920  response regulator [KO:K06596]
F9K07_23940  response regulator [KO:K02657]
F9K07_23935  response regulator [KO:K02658]
F9K07_26720  response regulator [KO:K13587] [EC:2.7.13.3]
F9K07_05365  HAMP domain-containing histidine kinase [KO:K10916] [EC:2.7.13.3 3.1.3.-]
F9K07_28830  PAS domain S-box protein [KO:K11711] [EC:2.7.13.3]
F9K07_28825  response regulator transcription factor [KO:K11712]
F9K07_27905  TRAP transporter large permease [KO:K11690]
F9K07_12160  TRAP transporter large permease [KO:K11690]
F9K07_00525  TRAP transporter large permease [KO:K11690]
F9K07_00595  TRAP transporter large permease [KO:K11690]
F9K07_01250  TRAP transporter large permease subunit [KO:K11690]
F9K07_24770  amino acid ABC transporter ATP-binding protein [KO:K10004] [EC:7.4.2.1]
F9K07_24775  amino acid ABC transporter permease [KO:K10002]
F9K07_24780  amino acid ABC transporter permease [KO:K10003]
F9K07_24785  transporter substrate-binding domain-containing protein [KO:K10001]
F9K07_14095  Crp/Fnr family transcriptional regulator [KO:K10914]
F9K07_08915  Crp/Fnr family transcriptional regulator [KO:K10914]
F9K07_17755  Crp/Fnr family transcriptional regulator [KO:K10914]
F9K07_02570  cyclic nucleotide-binding domain-containing protein [KO:K10914]
F9K07_03630  Crp/Fnr family transcriptional regulator [KO:K10914]
F9K07_29285  cyclic nucleotide-binding domain-containing protein [KO:K10914]
F9K07_01395  cyclic nucleotide-binding domain-containing protein [KO:K10914]
F9K07_04895  glutaminase [KO:K01425] [EC:3.5.1.2]
F9K07_11025  HAMP domain-containing histidine kinase [KO:K15011] [EC:2.7.13.3]
F9K07_11030  response regulator transcription factor [KO:K15012]
F9K07_25245  petA; ubiquinol-cytochrome c reductase iron-sulfur subunit [KO:K00411] [EC:7.1.1.8]
F9K07_25240  cytochrome bc complex cytochrome b subunit [KO:K00412]
F9K07_25235  cytochrome c1 [KO:K00413]
F9K07_29430  c-type cytochrome [KO:K08738]
F9K07_22670  c-type cytochrome [KO:K08738]
F9K07_16975  c-type cytochrome [KO:K08738]
F9K07_16735  ccoN; cytochrome-c oxidase, cbb3-type subunit I [KO:K00404] [EC:7.1.1.9]
F9K07_16730  ccoO; cytochrome-c oxidase, cbb3-type subunit II [KO:K00405]
F9K07_16725  cbb3-type cytochrome c oxidase subunit 3 [KO:K00407]
F9K07_16720  ccoP; cytochrome-c oxidase, cbb3-type subunit III [KO:K00406]
F9K07_23130  cytochrome ubiquinol oxidase subunit I [KO:K00425] [EC:7.1.1.7]
F9K07_23135  cytochrome d ubiquinol oxidase subunit II [KO:K00426] [EC:7.1.1.7]
F9K07_21720  TolC family outer membrane protein [KO:K12340]
F9K07_03610  methyltransferase domain-containing protein [KO:K19620]
F9K07_03605  two-component sensor histidine kinase [KO:K19621] [EC:2.7.13.3]
F9K07_03600  hybrid sensor histidine kinase/response regulator [KO:K19622]
F9K07_13840  sugar ABC transporter substrate-binding protein [KO:K01991]
F9K07_28535  polysaccharide export protein [KO:K01991]
F9K07_08470  low molecular weight phosphotyrosine protein phosphatase [KO:K25307] [EC:3.1.3.48]
F9K07_13905  UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) [KO:K01791] [EC:5.1.3.14]
F9K07_13910  wecC; UDP-N-acetyl-D-mannosamine dehydrogenase [KO:K02472] [EC:1.1.1.336]
F9K07_05370  helix-turn-helix transcriptional regulator [KO:K19666]
F9K07_20755  sigma-70 family RNA polymerase sigma factor [KO:K23514]
F9K07_20760  FecR family protein [KO:K07165]
F9K07_01470  DUF4880 domain-containing protein [KO:K07165]
F9K07_11110  response regulator [KO:K20974] [EC:2.7.13.3]
F9K07_27280  PAS domain S-box protein [KO:K20975] [EC:2.7.13.3]
F9K07_25855  flgM; flagellar biosynthesis anti-sigma factor FlgM [KO:K02398]
Compound
C00007  Oxygen
C00009  Orthophosphate
C00025  L-Glutamate
C00031  D-Glucose
C00034  Manganese
C00036  Oxaloacetate
C00038  Zinc cation
C00042  Succinate
C00049  L-Aspartate
C00064  L-Glutamine
C00070  Copper
C00088  Nitrite
C00092  D-Glucose 6-phosphate
C00122  Fumarate
C00149  (S)-Malate
C00158  Citrate
C00164  Acetoacetate
C00237  CO
C00238  Potassium cation
C00244  Nitrate
C00282  Hydrogen
C00291  Nickel
C00305  Magnesium cation
C00399  Ubiquinone
C00533  Nitric oxide
C00547  L-Noradrenaline
C00697  Nitrogen
C00788  L-Adrenaline
C00828  Menaquinone
C01019  L-Fucose
C01104  Trimethylamine N-oxide
C01667  Bacitracin
C02084  Tetrathionate
C05757  (3R)-3-Hydroxydodecanoyl-[acyl-carrier protein]
C05818  2-Demethylmenaquinone
C06230  Fe-enterobactin
C06689  Vancomycin
C06696  Lead
C11612  Polymyxin B
C11842  N-(3-(S)-Hydroxybutyryl)homoserine lactone
C11849  3-Hydroxy-palmitic acid methyl ester
C12008  Ramoplanin A2
C13768  Colistin sulfate
C14819  Fe3+
C16421  AI-2
C16463  3',5'-Cyclic diGMP
C16640  CAI-1
C16665  12-Methyltetradecanoic acid
C18206  cis-11-Methyl-2-dodecenoic acid
C21220  AIP-1
C21221  CSP
C21241  AIP-2
C21242  AIP-3
C21243  AIP-4
C21245  AgrD1 peptide
D07746  Colistin (INN)
D08401  Polymyxin B (INN)
Reference
PMID:15522865
  Authors
Yamamoto K, Hirao K, Oshima T, Aiba H, Utsumi R, Ishihama A.
  Title
Functional characterization in vitro of all two-component signal transduction systems from Escherichia coli.
  Journal
J Biol Chem 280:1448-56 (2005)
DOI:10.1074/jbc.M410104200
Reference
PMID:16030210
  Authors
Abdel-Fattah WR, Chen Y, Eldakak A, Hulett FM.
  Title
Bacillus subtilis phosphorylated PhoP: direct activation of the E(sigma)A- and repression of the E(sigma)E-responsive phoB-PS+V promoters during pho response.
  Journal
J Bacteriol 187:5166-78 (2005)
DOI:10.1128/JB.187.15.5166-5178.2005
Reference
PMID:15813739
  Authors
Navarre WW, Halsey TA, Walthers D, Frye J, McClelland M, Potter JL, Kenney LJ, Gunn JS, Fang FC, Libby SJ.
  Title
Co-regulation of Salmonella enterica genes required for virulence and resistance to antimicrobial peptides by SlyA and PhoP/PhoQ.
  Journal
Mol Microbiol 56:492-508 (2005)
DOI:10.1111/j.1365-2958.2005.04553.x
Reference
PMID:11973328
  Authors
Cai SJ, Inouye M.
  Title
EnvZ-OmpR interaction and osmoregulation in Escherichia coli.
  Journal
J Biol Chem 277:24155-61 (2002)
DOI:10.1074/jbc.M110715200
Reference
PMID:16077119
  Authors
Batchelor E, Walthers D, Kenney LJ, Goulian M.
  Title
The Escherichia coli CpxA-CpxR envelope stress response system regulates expression of the porins ompF and ompC.
  Journal
J Bacteriol 187:5723-31 (2005)
DOI:10.1128/JB.187.16.5723-5731.2005
Reference
PMID:12107133
  Authors
Nagakubo S, Nishino K, Hirata T, Yamaguchi A.
  Title
The putative response regulator BaeR stimulates multidrug resistance of Escherichia coli via a novel multidrug exporter system, MdtABC.
  Journal
J Bacteriol 184:4161-7 (2002)
DOI:10.1128/JB.184.15.4161-4167.2002
Reference
PMID:15322361
  Authors
Hagiwara D, Yamashino T, Mizuno T.
  Title
A Genome-wide view of the Escherichia coli BasS-BasR two-component system implicated in iron-responses.
  Journal
Biosci Biotechnol Biochem 68:1758-67 (2004)
DOI:10.1271/bbb.68.1758
Reference
PMID:11004187
  Authors
Munson GP, Lam DL, Outten FW, O'Halloran TV.
  Title
Identification of a copper-responsive two-component system on the chromosome of Escherichia coli K-12.
  Journal
J Bacteriol 182:5864-71 (2000)
DOI:10.1128/JB.182.20.5864-5871.2000
Reference
PMID:11929534
  Authors
Sperandio V, Torres AG, Kaper JB.
  Title
Quorum sensing Escherichia coli regulators B and C (QseBC): a novel two-component regulatory system involved in the regulation of flagella and motility by quorum sensing in E. coli.
  Journal
Mol Microbiol 43:809-21 (2002)
DOI:10.1046/j.1365-2958.2002.02803.x
Reference
PMID:14604015
  Authors
Epstein W.
  Title
The roles and regulation of potassium in bacteria.
  Journal
Prog Nucleic Acid Res Mol Biol 75:293-320 (2003)
DOI:10.1016/S0079-6603(03)75008-9
Reference
PMID:10648521
  Authors
Ansaldi M, Simon G, Lepelletier M, Mejean V.
  Title
The TorR high-affinity binding site plays a key role in both torR autoregulation and torCAD operon expression in Escherichia coli.
  Journal
J Bacteriol 182:961-6 (2000)
DOI:10.1128/JB.182.4.961-966.2000
Reference
PMID:15326287
  Authors
Malpica R, Franco B, Rodriguez C, Kwon O, Georgellis D.
  Title
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Diversity in bacterial chemotactic responses and niche adaptation.
  Journal
Adv Appl Microbiol 66:53-75 (2009)
DOI:10.1016/S0065-2164(08)00803-4
Reference
PMID:8760916
  Authors
Eder S, Shi L, Jensen K, Yamane K, Hulett FM
  Title
A Bacillus subtilis secreted phosphodiesterase/alkaline phosphatase is the product of a Pho regulon gene, phoD.
  Journal
Microbiology 142 ( Pt 8):2041-7 (1996)
DOI:10.1099/13500872-142-8-2041
Related
pathway
hyn00190  Oxidative phosphorylation
hyn00550  Peptidoglycan biosynthesis
hyn00910  Nitrogen metabolism
hyn02030  Bacterial chemotaxis
hyn02040  Flagellar assembly
hyn03070  Bacterial secretion system
KO pathway
ko02020   
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