KEGG   PATHWAY: izh00970
Entry
izh00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Jejubacter calystegiae
Class
Genetic Information Processing; Translation
Pathway map
izh00970  Aminoacyl-tRNA biosynthesis
izh00970

Organism
Jejubacter calystegiae [GN:izh]
Gene
FEM41_22865  tRNA-Ala [KO:K14218]
FEM41_05435  tRNA-Ala [KO:K14218]
FEM41_07110  tRNA-Ala [KO:K14218]
FEM41_23840  tRNA-Ala [KO:K14218]
FEM41_22870  tRNA-Ala [KO:K14218]
FEM41_24395  tRNA-Arg [KO:K14219]
FEM41_22715  tRNA-Arg [KO:K14219]
FEM41_06625  tRNA-Arg [KO:K14219]
FEM41_24400  tRNA-Arg [KO:K14219]
FEM41_24405  tRNA-Arg [KO:K14219]
FEM41_24410  tRNA-Arg [KO:K14219]
FEM41_24415  tRNA-Arg [KO:K14219]
FEM41_11705  tRNA-Arg [KO:K14219]
FEM41_21115  tRNA-Asn [KO:K14220]
FEM41_21230  tRNA-Asn [KO:K14220]
FEM41_21280  tRNA-Asn [KO:K14220]
FEM41_21295  tRNA-Asn [KO:K14220]
FEM41_06475  tRNA-Asp [KO:K14221]
FEM41_10265  tRNA-Asp [KO:K14221]
FEM41_10310  tRNA-Asp [KO:K14221]
FEM41_20955  tRNA-Cys [KO:K14222]
FEM41_13210  tRNA-Gln [KO:K14223]
FEM41_13225  tRNA-Gln [KO:K14223]
FEM41_13205  tRNA-Gln [KO:K14223]
FEM41_13220  tRNA-Gln [KO:K14223]
FEM41_03155  tRNA-Glu [KO:K14224]
FEM41_06460  tRNA-Glu [KO:K14224]
FEM41_06895  tRNA-Glu [KO:K14224]
FEM41_10250  tRNA-Glu [KO:K14224]
FEM41_00710  tRNA-Gly [KO:K14225]
FEM41_07825  tRNA-Gly [KO:K14225]
FEM41_07830  tRNA-Gly [KO:K14225]
FEM41_07840  tRNA-Gly [KO:K14225]
FEM41_20960  tRNA-Gly [KO:K14225]
FEM41_06935  tRNA-Gly [KO:K14225]
FEM41_06630  tRNA-His [KO:K14226]
FEM41_05440  tRNA-Ile [KO:K14227]
FEM41_07105  tRNA-Ile [KO:K14227]
FEM41_23845  tRNA-Ile [KO:K14227]
FEM41_02715  tRNA-Leu [KO:K14228]
FEM41_20950  tRNA-Leu [KO:K14228]
FEM41_13230  tRNA-Leu [KO:K14228]
FEM41_08445  tRNA-Leu [KO:K14228]
FEM41_06635  tRNA-Leu [KO:K14228]
FEM41_08975  tRNA-Leu [KO:K14228]
FEM41_08980  tRNA-Leu [KO:K14228]
FEM41_08985  tRNA-Leu [KO:K14228]
FEM41_13505  tRNA-Lys [KO:K14229]
FEM41_13515  tRNA-Lys [KO:K14229]
FEM41_13520  tRNA-Lys [KO:K14229]
FEM41_13525  tRNA-Lys [KO:K14229]
FEM41_22905  tRNA-Lys [KO:K14229]
FEM41_13215  tRNA-Met [KO:K14230]
FEM41_00415  tRNA-Met [KO:K14230]
FEM41_00420  tRNA-Met [KO:K14230]
FEM41_01865  tRNA-Met [KO:K14230]
FEM41_02710  tRNA-Met [KO:K14230]
FEM41_13235  tRNA-Met [KO:K14230]
FEM41_01205  tRNA-Phe [KO:K14231]
FEM41_07680  tRNA-Phe [KO:K14231]
FEM41_04385  tRNA-Pro [KO:K14232]
FEM41_22060  tRNA-Pro [KO:K14232]
FEM41_06640  tRNA-Pro [KO:K14232]
FEM41_24420  tRNA-Ser [KO:K14233]
FEM41_15135  tRNA-Ser [KO:K14233]
FEM41_14645  tRNA-Ser [KO:K14233]
FEM41_15255  tRNA-Ser [KO:K14233]
FEM41_21105  tRNA-Ser [KO:K14233]
FEM41_06940  tRNA-Thr [KO:K14234]
FEM41_10425  tRNA-Thr [KO:K14234]
FEM41_06925  tRNA-Thr [KO:K14234]
FEM41_03140  tRNA-Thr [KO:K14234]
FEM41_06480  tRNA-Trp [KO:K14235]
FEM41_06930  tRNA-Tyr [KO:K14236]
FEM41_19170  tRNA-Tyr [KO:K14236]
FEM41_19175  tRNA-Tyr [KO:K14236]
FEM41_13510  tRNA-Val [KO:K14237]
FEM41_16400  tRNA-Val [KO:K14237]
FEM41_16395  tRNA-Val [KO:K14237]
FEM41_22890  tRNA-Val [KO:K14237]
FEM41_22895  tRNA-Val [KO:K14237]
FEM41_22900  tRNA-Val [KO:K14237]
FEM41_04705  tRNA-Sec [KO:K14238]
FEM41_22885  gltX; glutamate--tRNA ligase [KO:K01885] [EC:6.1.1.17]
FEM41_13270  glnS; glutamine--tRNA ligase [KO:K01886] [EC:6.1.1.18]
FEM41_24430  alaS; alanine--tRNA ligase [KO:K01872] [EC:6.1.1.7]
FEM41_20410  aspS; aspartate--tRNA ligase [KO:K01876] [EC:6.1.1.12]
FEM41_14480  asnS; asparagine--tRNA ligase [KO:K01893] [EC:6.1.1.22]
FEM41_04520  glyQ; glycine--tRNA ligase subunit alpha [KO:K01878] [EC:6.1.1.14]
FEM41_04515  glyS; glycine--tRNA ligase subunit beta [KO:K01879] [EC:6.1.1.14]
FEM41_16090  thrS; threonine--tRNA ligase [KO:K01868] [EC:6.1.1.3]
FEM41_14315  serS; serine--tRNA ligase [KO:K01875] [EC:6.1.1.11]
FEM41_08245  DgaE family pyridoxal phosphate-dependent ammonia lyase [KO:K01042] [EC:2.9.1.1]
FEM41_04585  L-seryl-tRNA(Sec) selenium transferase [KO:K01042] [EC:2.9.1.1]
FEM41_11620  cysS; cysteine--tRNA ligase [KO:K01883] [EC:6.1.1.16]
FEM41_21800  metG; methionine--tRNA ligase [KO:K01874] [EC:6.1.1.10]
FEM41_03205  methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
FEM41_02570  valine--tRNA ligase [KO:K01873] [EC:6.1.1.9]
FEM41_13145  leuS; leucine--tRNA ligase [KO:K01869] [EC:6.1.1.4]
FEM41_09245  ileS; isoleucine--tRNA ligase [KO:K01870] [EC:6.1.1.5]
FEM41_00720  lysS; lysine--tRNA ligase [KO:K04567] [EC:6.1.1.6]
FEM41_07640  argS; arginine--tRNA ligase [KO:K01887] [EC:6.1.1.19]
FEM41_20475  argS; arginine--tRNA ligase [KO:K01887] [EC:6.1.1.19]
FEM41_10210  proS; proline--tRNA ligase [KO:K01881] [EC:6.1.1.15]
FEM41_21755  hisS; histidine--tRNA ligase [KO:K01892] [EC:6.1.1.21]
FEM41_21760  histidine--tRNA ligase [KO:K01892] [EC:6.1.1.21]
FEM41_23420  hisS; histidine--tRNA ligase [KO:K01892] [EC:6.1.1.21]
FEM41_16115  pheS; phenylalanine--tRNA ligase subunit alpha [KO:K01889] [EC:6.1.1.20]
FEM41_16120  pheT; phenylalanine--tRNA ligase subunit beta [KO:K01890] [EC:6.1.1.20]
FEM41_16530  tyrS; tyrosine--tRNA ligase [KO:K01866] [EC:6.1.1.1]
FEM41_03575  trpS; tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
izh00250  Alanine, aspartate and glutamate metabolism
izh00260  Glycine, serine and threonine metabolism
izh00270  Cysteine and methionine metabolism
izh00290  Valine, leucine and isoleucine biosynthesis
izh00300  Lysine biosynthesis
izh00330  Arginine and proline metabolism
izh00340  Histidine metabolism
izh00380  Tryptophan metabolism
izh00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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