KEGG   PATHWAY: kph00030
Entry
kph00030                    Pathway                                
Name
Pentose phosphate pathway - Klebsiella pneumoniae subsp. pneumoniae KPNIH24
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
kph00030  Pentose phosphate pathway
kph00030

Module
kph_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:kph00030]
kph_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:kph00030]
kph_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:kph00030]
kph_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:kph00030]
kph_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:kph00030]
kph_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:kph00030]
kph_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:kph00030]
Other DBs
GO: 0006098
Organism
Klebsiella pneumoniae subsp. pneumoniae KPNIH24 [GN:kph]
Gene
KPNIH24_01350  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
KPNIH24_11645  glucose-6-phosphate dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
KPNIH24_20740  6-phosphogluconolactonase [KO:K07404] [EC:3.1.1.31]
KPNIH24_02515  6-phosphogluconolactonase [KO:K07404] [EC:3.1.1.31]
KPNIH24_10835  6-phosphogluconate dehydrogenase [KO:K00033] [EC:1.1.1.44 1.1.1.343]
KPNIH24_24470  ribulose-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
KPNIH24_09320  transketolase [KO:K00615] [EC:2.2.1.1]
KPNIH24_21630  transketolase [KO:K00615] [EC:2.2.1.1]
KPNIH24_21635  transketolase [KO:K00615] [EC:2.2.1.1]
KPNIH24_20485  transketolase [KO:K00615] [EC:2.2.1.1]
KPNIH24_20490  transketolase [KO:K00615] [EC:2.2.1.1]
KPNIH24_06765  transketolase [KO:K00615] [EC:2.2.1.1]
KPNIH24_09325  transaldolase [KO:K00616] [EC:2.2.1.2]
KPNIH24_03670  transaldolase [KO:K00616] [EC:2.2.1.2]
KPNIH24_06805  ribose 5-phosphate isomerase [KO:K01807] [EC:5.3.1.6]
KPNIH24_03535  deoxyribose-phosphate aldolase [KO:K01619] [EC:4.1.2.4]
KPNIH24_15090  deoxyribose-phosphate aldolase [KO:K01619] [EC:4.1.2.4]
KPNIH24_14955  carbohydrate kinase [KO:K00852] [EC:2.7.1.15]
KPNIH24_00055  ribokinase [KO:K00852] [EC:2.7.1.15]
KPNIH24_15105  carbohydrate kinase [KO:K00852] [EC:2.7.1.15]
KPNIH24_03545  phosphopentomutase [KO:K01839] [EC:5.4.2.7]
KPNIH24_21065  phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
KPNIH24_01755  ribose-phosphate pyrophosphokinase [KO:K05774] [EC:2.7.4.23]
KPNIH24_12330  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
KPNIH24_11650  phosphogluconate dehydratase [KO:K01690] [EC:4.2.1.12]
KPNIH24_11655  keto-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
KPNIH24_04315  glucose dehydrogenase [KO:K00117] [EC:1.1.5.2]
KPNIH24_13125  GMC family oxidoreductase [KO:K06151] [EC:1.1.99.3]
KPNIH24_13120  gluconate 2-dehydrogenase [KO:K06152] [EC:1.1.99.3]
KPNIH24_25280  bifunctional glyoxylate/hydroxypyruvate reductase B [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
KPNIH24_24700  gntK; gluconate kinase [KO:K00851] [EC:2.7.1.12]
KPNIH24_25075  ketodeoxygluconokinase [KO:K00874] [EC:2.7.1.45]
KPNIH24_25270  2-dehydro-3-deoxygluconokinase [KO:K00874] [EC:2.7.1.45]
KPNIH24_17840  hydroxypyruvate reductase [KO:K11529] [EC:2.7.1.165]
KPNIH24_10575  fructose-bisphosphate aldolase [KO:K11645] [EC:4.1.2.13]
KPNIH24_23355  fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
KPNIH24_00250  iron ABC transporter substrate-binding protein [KO:K01624] [EC:4.1.2.13]
KPNIH24_06780  fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
KPNIH24_02440  fructose 1,6-bisphosphatase [KO:K03841] [EC:3.1.3.11]
KPNIH24_25720  fructose 1,6-bisphosphatase [KO:K02446] [EC:3.1.3.11]
KPNIH24_00235  permease [KO:K00850] [EC:2.7.1.11]
KPNIH24_00390  6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
KPNIH24_12605  6-phosphofructokinase [KO:K16370] [EC:2.7.1.11]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
kph00010  Glycolysis / Gluconeogenesis
kph00040  Pentose and glucuronate interconversions
kph00052  Galactose metabolism
kph00230  Purine metabolism
kph00240  Pyrimidine metabolism
kph00340  Histidine metabolism
kph00630  Glyoxylate and dicarboxylate metabolism
kph00750  Vitamin B6 metabolism
KO pathway
ko00030   
LinkDB

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