KEGG   PATHWAY: lcre00970
Entry
lcre00970                   Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Lignipirellula cremea
Class
Genetic Information Processing; Translation
Pathway map
lcre00970  Aminoacyl-tRNA biosynthesis
lcre00970

Organism
Lignipirellula cremea [GN:lcre]
Gene
Pla8534_51130  tRNA-Ala [KO:K14218]
Pla8534_42470  tRNA-Ala [KO:K14218]
Pla8534_22330  tRNA-Arg [KO:K14219]
Pla8534_04780  tRNA-Arg [KO:K14219]
Pla8534_14300  tRNA-Arg [KO:K14219]
Pla8534_26170  tRNA-Arg [KO:K14219]
Pla8534_36450  tRNA-Asn [KO:K14220]
Pla8534_46320  tRNA-Asp [KO:K14221]
Pla8534_54050  tRNA-Cys [KO:K14222]
Pla8534_16580  tRNA-Glu [KO:K14224]
Pla8534_61260  tRNA-Gly [KO:K14225]
Pla8534_61760  tRNA-Gly [KO:K14225]
Pla8534_47620  tRNA-Ile [KO:K14227]
Pla8534_64230  tRNA-Leu [KO:K14228]
Pla8534_15010  tRNA-Leu [KO:K14228]
Pla8534_33770  tRNA-Lys [KO:K14229]
Pla8534_55240  tRNA-Met [KO:K14230]
Pla8534_30050  tRNA-Met [KO:K14230]
Pla8534_10470  tRNA-Phe [KO:K14231]
Pla8534_48650  tRNA-Pro [KO:K14232]
Pla8534_19220  tRNA-Pro [KO:K14232]
Pla8534_30230  tRNA-Pro [KO:K14232]
Pla8534_28110  tRNA-Thr [KO:K14234]
Pla8534_61750  tRNA-Thr [KO:K14234]
Pla8534_61730  tRNA-Trp [KO:K14235]
Pla8534_57690  tRNA-Sec [KO:K14238]
Pla8534_56730  gatA_2; Glutamyl-tRNA(Gln) amidotransferase subunit A [KO:K02433] [EC:6.3.5.6 6.3.5.7]
Pla8534_56720  gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [KO:K02434] [EC:6.3.5.6 6.3.5.7]
Pla8534_63100  gatC; Glutamyl-tRNA(Gln) amidotransferase subunit C [KO:K02435] [EC:6.3.5.6 6.3.5.7]
Pla8534_28450  glnS; Glutamine--tRNA ligase [KO:K01886] [EC:6.1.1.18]
Pla8534_11080  alaS; Alanine--tRNA ligase [KO:K01872] [EC:6.1.1.7]
Pla8534_41350  aspS; Aspartate--tRNA ligase [KO:K01876] [EC:6.1.1.12]
Pla8534_14530  asnS; Asparagine--tRNA ligase [KO:K01893] [EC:6.1.1.22]
Pla8534_42290  glyQS; Glycine--tRNA ligase [KO:K01880] [EC:6.1.1.14]
Pla8534_39510  thrS; Threonine--tRNA ligase [KO:K01868] [EC:6.1.1.3]
Pla8534_47870  serS; Serine--tRNA ligase [KO:K01875] [EC:6.1.1.11]
Pla8534_31340  selA; L-seryl-tRNA(Sec) selenium transferase [KO:K01042] [EC:2.9.1.1]
Pla8534_50120  cysS; Cysteine--tRNA ligase [KO:K01883] [EC:6.1.1.16]
Pla8534_36660  metG; Methionine--tRNA ligase [KO:K01874] [EC:6.1.1.10]
Pla8534_36790  fmt; Methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
Pla8534_70690  valS; Valine--tRNA ligase [KO:K01873] [EC:6.1.1.9]
Pla8534_23900  leuS; Leucine--tRNA ligase [KO:K01869] [EC:6.1.1.4]
Pla8534_35300  ileS; Isoleucine--tRNA ligase [KO:K01870] [EC:6.1.1.5]
Pla8534_05220  lysS; Lysine--tRNA ligase [KO:K04567] [EC:6.1.1.6]
Pla8534_50490  argS; Arginine--tRNA ligase [KO:K01887] [EC:6.1.1.19]
Pla8534_38820  proS; Proline--tRNA ligase [KO:K01881] [EC:6.1.1.15]
Pla8534_39420  hisS; Histidine--tRNA ligase [KO:K01892] [EC:6.1.1.21]
Pla8534_19530  pheS; Phenylalanine--tRNA ligase alpha subunit [KO:K01889] [EC:6.1.1.20]
Pla8534_19520  pheT; Phenylalanine--tRNA ligase beta subunit [KO:K01890] [EC:6.1.1.20]
Pla8534_25960  tyrS; Tyrosine--tRNA ligase [KO:K01866] [EC:6.1.1.1]
Pla8534_13160  trpS; Tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
lcre00250  Alanine, aspartate and glutamate metabolism
lcre00260  Glycine, serine and threonine metabolism
lcre00270  Cysteine and methionine metabolism
lcre00290  Valine, leucine and isoleucine biosynthesis
lcre00300  Lysine biosynthesis
lcre00330  Arginine and proline metabolism
lcre00340  Histidine metabolism
lcre00380  Tryptophan metabolism
lcre00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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