KEGG   PATHWAY: lcs00240
Entry
lcs00240                    Pathway                                
Name
Pyrimidine metabolism - Lacticaseibacillus paracasei BD-II
Class
Metabolism; Nucleotide metabolism
Pathway map
lcs00240  Pyrimidine metabolism
lcs00240

Module
lcs_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:lcs00240]
lcs_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:lcs00240]
lcs_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:lcs00240]
Other DBs
GO: 0006220 0006213
Organism
Lacticaseibacillus paracasei BD-II [GN:lcs]
Gene
LCBD_1656  carB; Carbamoyl-phosphate synthase large chain [KO:K01955] [EC:6.3.5.5]
LCBD_1657  carA; Carbamoyl-phosphate synthase small chain, putative [KO:K01956] [EC:6.3.5.5]
LCBD_1659  pyrB; Aspartate carbamoyltransferase [KO:K00609] [EC:2.1.3.2]
LCBD_1658  Dihydroorotase [KO:K01465] [EC:3.5.2.3]
LCBD_2921  hypothetical protein [KO:K01465] [EC:3.5.2.3]
LCBD_1655  Dihydroorotate dehydrogenase family protein [KO:K17828] [EC:1.3.1.14]
LCBD_1929  Aspartate carbamoyltransferase and dihydroorotate dehydrogenase [KO:K00226] [EC:1.3.98.1]
LCBD_1653  Orotidine-5'-phosphate decarboxylase [KO:K00762] [EC:2.4.2.10]
LCBD_1654  Orotidine 5'-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23]
LCBD_1783  Uridylate kinase [KO:K09903] [EC:2.7.4.22]
LCBD_0825  hypothetical protein [KO:K00940] [EC:2.7.4.6]
LCBD_2409  maf; Nucleotide binding protein [KO:K06287] [EC:3.6.1.-]
LCBD_2749  CTP synthetase [KO:K01937] [EC:6.3.4.2]
LCBD_1577  Pantoate/beta-alanine ligase [KO:K00945] [EC:2.7.4.25]
LCBD_1865  Putative uridine kinase/uracil phosp (ISS) [KO:K00876] [EC:2.7.1.48]
LCBD_2532  hypothetical protein [KO:K00757] [EC:2.4.2.3]
LCBD_1358  Uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9]
LCBD_1661  pyrR; Uracil phosphoribosyltransferase [KO:K02825] [EC:2.4.2.9]
LCBD_1559  ushA; Multifunctional protein: 5-nucleotidase 2,3-cyclic-nucleotide 2-phosphodiesterase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
LCBD_2381  Pyrimidine-nucleoside phosphorylase [KO:K00756] [EC:2.4.2.2]
LCBD_1715  Pyrimidine-nucleoside phosphorylase [KO:K01489] [EC:3.5.4.5]
LCBD_2467  Ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent, putative [KO:K00527] [EC:1.17.4.2]
LCBD_0123  nrdD; Oxygen-sensitive ribonucleoside-triphosphate reductase [KO:K21636] [EC:1.1.98.6]
LCBD_1673  Ribonucleotide-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
LCBD_1674  nrdF; hypothetical protein [KO:K00526] [EC:1.17.4.1]
LCBD_1686  Transcriptional regulator, TetR family protein [KO:K01493] [EC:3.5.4.12]
LCBD_2438  Thymidylate kinase [KO:K00943] [EC:2.7.4.9]
LCBD_2511  coaBC; Coenzyme A biosynthesis bifunctional protein coaBC (DNA/pantothenat metabolism flavoprotein) [KO:K01520] [EC:3.6.1.23]
LCBD_1353  kitH; Thymidine kinase [KO:K00857] [EC:2.7.1.21]
LCBD_1586  Thymidylate synthase [KO:K00560] [EC:2.1.1.45]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
lcs00030  Pentose phosphate pathway
lcs00220  Arginine biosynthesis
lcs00250  Alanine, aspartate and glutamate metabolism
lcs00280  Valine, leucine and isoleucine degradation
KO pathway
ko00240   
LinkDB

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