KEGG   PATHWAY: lho00030
Entry
lho00030                    Pathway                                
Name
Pentose phosphate pathway - Paucilactobacillus hokkaidonensis
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
lho00030  Pentose phosphate pathway
lho00030

Module
lho_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:lho00030]
lho_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:lho00030]
lho_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:lho00030]
lho_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:lho00030]
lho_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:lho00030]
Other DBs
GO: 0006098
Organism
Paucilactobacillus hokkaidonensis [GN:lho]
Gene
LOOC260_116260  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
LOOC260_121010  zwf; glucose-6-phosphate dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
LOOC260_120890  hypothetical protein [KO:K07404] [EC:3.1.1.31]
LOOC260_113940  6-phosphogluconolactonase [KO:K07404] [EC:3.1.1.31]
LOOC260_102030  hypothetical protein [KO:K07404] [EC:3.1.1.31]
LOOC260_121020  pgd; 6-phosphogluconate dehydrogenase [KO:K00033] [EC:1.1.1.44 1.1.1.343]
LOOC260_120720  pgd; 6-phosphogluconate dehydrogenase [KO:K00033] [EC:1.1.1.44 1.1.1.343]
LOOC260_110360  rpe; ribulose-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
LOOC260_107660  transketolase [KO:K00615] [EC:2.2.1.1]
LOOC260_111550  talA; transaldolase [KO:K00616] [EC:2.2.1.2]
LOOC260_104480  ribose-5-phosphate isomerase A [KO:K01807] [EC:5.3.1.6]
LOOC260_200770  ribose-5-phosphate isomerase A [KO:K01807] [EC:5.3.1.6]
LOOC260_110490  xpk; phosphoketolase [KO:K01621] [EC:4.1.2.9 4.1.2.22]
LOOC260_120010  xpk; phosphoketolase [KO:K01621] [EC:4.1.2.9 4.1.2.22]
LOOC260_119020  deoC; deoxyribose-phosphate aldolase [KO:K01619] [EC:4.1.2.4]
LOOC260_108750  rbsK; ribokinase [KO:K00852] [EC:2.7.1.15]
LOOC260_119010  deoB; phosphopentomutase [KO:K01839] [EC:5.4.2.7]
LOOC260_116920  pgm; phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
LOOC260_103790  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
LOOC260_113600  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
LOOC260_107760  keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
LOOC260_120750  keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
LOOC260_106390  gluconokinase [KO:K25031] [EC:2.7.1.12]
LOOC260_120860  gluconokinase [KO:K25031] [EC:2.7.1.12]
LOOC260_113040  PfkB family carbohydrate kinase [KO:K00874] [EC:2.7.1.45]
LOOC260_120760  2-keto-3-deoxygluconate kinase [KO:K00874] [EC:2.7.1.45]
LOOC260_108700  PTS ascorbate transporter subunit IIC [KO:K17465] [EC:2.7.1.203]
LOOC260_108670  PTS sorbose transporter subunit IIC [KO:K17466]
LOOC260_108680  PTS mannose transporter subunit IID [KO:K17467]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
lho00010  Glycolysis / Gluconeogenesis
lho00040  Pentose and glucuronate interconversions
lho00052  Galactose metabolism
lho00230  Purine metabolism
lho00240  Pyrimidine metabolism
lho00340  Histidine metabolism
lho00630  Glyoxylate and dicarboxylate metabolism
lho00750  Vitamin B6 metabolism
KO pathway
ko00030   
LinkDB

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