KEGG   PATHWAY: lot00970
Entry
lot00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Leptotrichia sp. oral taxon 847
Class
Genetic Information Processing; Translation
Pathway map
lot00970  Aminoacyl-tRNA biosynthesis
lot00970

Organism
Leptotrichia sp. oral taxon 847 [GN:lot]
Gene
AXF11_02970  tRNA-Ala [KO:K14218]
AXF11_06410  tRNA-Ala [KO:K14218]
AXF11_04235  tRNA-Arg [KO:K14219]
AXF11_04820  tRNA-Arg [KO:K14219]
AXF11_06960  tRNA-Arg [KO:K14219]
AXF11_06320  tRNA-Asn [KO:K14220]
AXF11_05080  tRNA-Asn [KO:K14220]
AXF11_06425  tRNA-Asn [KO:K14220]
AXF11_02955  tRNA-Asn [KO:K14220]
AXF11_05145  tRNA-Asn [KO:K14220]
AXF11_04850  tRNA-Asp [KO:K14221]
AXF11_03430  tRNA-Asp [KO:K14221]
AXF11_08250  tRNA-Cys [KO:K14222]
AXF11_06020  tRNA-Gln [KO:K14223]
AXF11_06130  tRNA-Gln [KO:K14223]
AXF11_04860  tRNA-Glu [KO:K14224]
AXF11_04225  tRNA-Glu [KO:K14224]
AXF11_07265  tRNA-Gly [KO:K14225]
AXF11_04245  tRNA-Gly [KO:K14225]
AXF11_07270  tRNA-His [KO:K14226]
AXF11_02975  tRNA-Ile [KO:K14227]
AXF11_06405  tRNA-Ile [KO:K14227]
AXF11_07280  tRNA-Leu [KO:K14228]
AXF11_08245  tRNA-Leu [KO:K14228]
AXF11_04250  tRNA-Leu [KO:K14228]
AXF11_07275  tRNA-Lys [KO:K14229]
AXF11_01845  tRNA-Lys [KO:K14229]
AXF11_04240  tRNA-Lys [KO:K14229]
AXF11_05375  tRNA-Met [KO:K14230]
AXF11_05380  tRNA-Met [KO:K14230]
AXF11_04230  tRNA-Met [KO:K14230]
AXF11_04215  tRNA-Phe [KO:K14231]
AXF11_03435  tRNA-Phe [KO:K14231]
AXF11_07260  tRNA-Pro [KO:K14232]
AXF11_04825  tRNA-Ser [KO:K14233]
AXF11_04220  tRNA-Ser [KO:K14233]
AXF11_04830  tRNA-Ser [KO:K14233]
AXF11_06865  tRNA-Thr [KO:K14234]
AXF11_04845  tRNA-Thr [KO:K14234]
AXF11_01530  tRNA-Trp [KO:K14235]
AXF11_04840  tRNA-Tyr [KO:K14236]
AXF11_03425  tRNA-Val [KO:K14237]
AXF11_04855  tRNA-Val [KO:K14237]
AXF11_00515  glutamate--tRNA ligase [KO:K01885] [EC:6.1.1.17]
AXF11_04680  gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A [KO:K02433] [EC:6.3.5.6 6.3.5.7]
AXF11_04675  glutamyl-tRNA amidotransferase [KO:K02434] [EC:6.3.5.6 6.3.5.7]
AXF11_04685  asparaginyl/glutamyl-tRNA amidotransferase subunit C [KO:K02435] [EC:6.3.5.6 6.3.5.7]
AXF11_08345  alanine--tRNA ligase [KO:K01872] [EC:6.1.1.7]
AXF11_04040  aspartate--tRNA ligase [KO:K01876] [EC:6.1.1.12]
AXF11_01085  asparagine--tRNA ligase [KO:K01893] [EC:6.1.1.22]
AXF11_04980  glycine--tRNA ligase subunit alpha [KO:K01878] [EC:6.1.1.14]
AXF11_04975  glycine--tRNA ligase subunit beta [KO:K01879] [EC:6.1.1.14]
AXF11_04885  threonine--tRNA ligase [KO:K01868] [EC:6.1.1.3]
AXF11_07005  serine--tRNA ligase [KO:K01875] [EC:6.1.1.11]
AXF11_05060  cysteine--tRNA ligase [KO:K01883] [EC:6.1.1.16]
AXF11_09635  methionine--tRNA ligase [KO:K01874] [EC:6.1.1.10]
AXF11_03595  methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
AXF11_01750  valine--tRNA ligase [KO:K01873] [EC:6.1.1.9]
AXF11_04165  leucine--tRNA ligase [KO:K01869] [EC:6.1.1.4]
AXF11_04995  ileS; isoleucine--tRNA ligase [KO:K01870] [EC:6.1.1.5]
AXF11_04630  lysine--tRNA ligase [KO:K04567] [EC:6.1.1.6]
AXF11_03630  arginine--tRNA ligase [KO:K01887] [EC:6.1.1.19]
AXF11_04580  proline--tRNA ligase [KO:K01881] [EC:6.1.1.15]
AXF11_04050  hypothetical protein [KO:K01892] [EC:6.1.1.21]
AXF11_05340  pheS; phenylalanine--tRNA ligase subunit alpha [KO:K01889] [EC:6.1.1.20]
AXF11_05335  phenylalanine--tRNA ligase subunit beta [KO:K01890] [EC:6.1.1.20]
AXF11_07855  tyrosine--tRNA ligase [KO:K01866] [EC:6.1.1.1]
AXF11_09550  tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
lot00250  Alanine, aspartate and glutamate metabolism
lot00260  Glycine, serine and threonine metabolism
lot00270  Cysteine and methionine metabolism
lot00290  Valine, leucine and isoleucine biosynthesis
lot00300  Lysine biosynthesis
lot00330  Arginine and proline metabolism
lot00340  Histidine metabolism
lot00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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