KEGG   PATHWAY: lrn00970
Entry
lrn00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Lactococcus raffinolactis
Class
Genetic Information Processing; Translation
Pathway map
lrn00970  Aminoacyl-tRNA biosynthesis
lrn00970

Organism
Lactococcus raffinolactis [GN:lrn]
Gene
CMV25_04060  tRNA-Ala [KO:K14218]
CMV25_05245  tRNA-Ala [KO:K14218]
CMV25_05920  tRNA-Ala [KO:K14218]
CMV25_08490  tRNA-Ala [KO:K14218]
CMV25_08905  tRNA-Arg [KO:K14219]
CMV25_05970  tRNA-Arg [KO:K14219]
CMV25_02795  tRNA-Arg [KO:K14219]
CMV25_09155  tRNA-Arg [KO:K14219]
CMV25_08540  tRNA-Arg [KO:K14219]
CMV25_05230  tRNA-Asn [KO:K14220]
CMV25_05260  tRNA-Asn [KO:K14220]
CMV25_05205  tRNA-Asp [KO:K14221]
CMV25_05940  tRNA-Asp [KO:K14221]
CMV25_08510  tRNA-Asp [KO:K14221]
CMV25_07430  tRNA-Cys [KO:K14222]
CMV25_04025  tRNA-Gln [KO:K14223]
CMV25_05795  tRNA-Glu [KO:K14224]
CMV25_05190  tRNA-Glu [KO:K14224]
CMV25_05960  tRNA-Gly [KO:K14225]
CMV25_08530  tRNA-Gly [KO:K14225]
CMV25_05215  tRNA-Gly [KO:K14225]
CMV25_08570  tRNA-Gly [KO:K14225]
CMV25_04030  tRNA-His [KO:K14226]
CMV25_05220  tRNA-Ile [KO:K14227]
CMV25_08575  tRNA-Ile [KO:K14227]
CMV25_04020  tRNA-Leu [KO:K14228]
CMV25_05965  tRNA-Leu [KO:K14228]
CMV25_08535  tRNA-Leu [KO:K14228]
CMV25_05950  tRNA-Leu [KO:K14228]
CMV25_08520  tRNA-Leu [KO:K14228]
CMV25_06555  tRNA-Leu [KO:K14228]
CMV25_03525  tRNA-Leu [KO:K14228]
CMV25_05945  tRNA-Lys [KO:K14229]
CMV25_04995  tRNA-Lys [KO:K14229]
CMV25_08515  tRNA-Lys [KO:K14229]
CMV25_05200  tRNA-Met [KO:K14230]
CMV25_08550  tRNA-Met [KO:K14230]
CMV25_08555  tRNA-Met [KO:K14230]
CMV25_05210  tRNA-Phe [KO:K14231]
CMV25_08565  tRNA-Phe [KO:K14231]
CMV25_05975  tRNA-Pro [KO:K14232]
CMV25_08545  tRNA-Pro [KO:K14232]
CMV25_08560  tRNA-Ser [KO:K14233]
CMV25_05195  tRNA-Ser [KO:K14233]
CMV25_08580  tRNA-Ser [KO:K14233]
CMV25_08480  tRNA-Ser [KO:K14233]
CMV25_05955  tRNA-Thr [KO:K14234]
CMV25_08525  tRNA-Thr [KO:K14234]
CMV25_07885  tRNA-Thr [KO:K14234]
CMV25_07890  tRNA-Thr [KO:K14234]
CMV25_04035  tRNA-Trp [KO:K14235]
CMV25_04040  tRNA-Tyr [KO:K14236]
CMV25_04045  tRNA-Val [KO:K14237]
CMV25_05935  tRNA-Val [KO:K14237]
CMV25_08505  tRNA-Val [KO:K14237]
CMV25_03325  glutamate--tRNA ligase [KO:K09698] [EC:6.1.1.24]
CMV25_06705  Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit A [KO:K02433] [EC:6.3.5.6 6.3.5.7]
CMV25_06715  Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit B [KO:K02434] [EC:6.3.5.6 6.3.5.7]
CMV25_06700  Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit C [KO:K02435] [EC:6.3.5.6 6.3.5.7]
CMV25_01770  alanine--tRNA ligase [KO:K01872] [EC:6.1.1.7]
CMV25_06460  aspartate--tRNA ligase [KO:K01876] [EC:6.1.1.12]
CMV25_06695  aspartate--tRNA ligase [KO:K01876] [EC:6.1.1.12]
CMV25_08180  asparagine--tRNA ligase [KO:K01893] [EC:6.1.1.22]
CMV25_09210  glyQ; glycine--tRNA ligase subunit alpha [KO:K01878] [EC:6.1.1.14]
CMV25_09215  glycine--tRNA ligase subunit beta [KO:K01879] [EC:6.1.1.14]
CMV25_08145  threonine--tRNA ligase [KO:K01868] [EC:6.1.1.3]
CMV25_09005  serine--tRNA ligase [KO:K01875] [EC:6.1.1.11]
CMV25_07840  SelA-like pyridoxal phosphate-dependent enzyme [KO:K01042] [EC:2.9.1.1]
CMV25_08085  cysteine--tRNA ligase [KO:K01883] [EC:6.1.1.16]
CMV25_08675  methionine--tRNA ligase [KO:K01874] [EC:6.1.1.10]
CMV25_03880  methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
CMV25_03495  valine--tRNA ligase [KO:K01873] [EC:6.1.1.9]
CMV25_08725  leucine--tRNA ligase [KO:K01869] [EC:6.1.1.4]
CMV25_03095  isoleucine--tRNA ligase [KO:K01870] [EC:6.1.1.5]
CMV25_06605  lysS; lysine--tRNA ligase [KO:K04567] [EC:6.1.1.6]
CMV25_03690  arginine--tRNA ligase [KO:K01887] [EC:6.1.1.19]
CMV25_05010  proline--tRNA ligase [KO:K01881] [EC:6.1.1.15]
CMV25_06445  histidine--tRNA ligase [KO:K01892] [EC:6.1.1.21]
CMV25_07905  phenylalanine--tRNA ligase subunit alpha [KO:K01889] [EC:6.1.1.20]
CMV25_07910  phenylalanine--tRNA ligase subunit beta [KO:K01890] [EC:6.1.1.20]
CMV25_06365  tyrosine--tRNA ligase [KO:K01866] [EC:6.1.1.1]
CMV25_04940  trpS; tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
lrn00250  Alanine, aspartate and glutamate metabolism
lrn00260  Glycine, serine and threonine metabolism
lrn00270  Cysteine and methionine metabolism
lrn00290  Valine, leucine and isoleucine biosynthesis
lrn00300  Lysine biosynthesis
lrn00330  Arginine and proline metabolism
lrn00340  Histidine metabolism
lrn00380  Tryptophan metabolism
lrn00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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