KEGG   PATHWAY: maj00020
Entry
maj00020                    Pathway                                
Name
Citrate cycle (TCA cycle) - Metarhizium robertsii
Description
The citrate cycle (TCA cycle, Krebs cycle) is an important aerobic pathway for the final steps of the oxidation of carbohydrates and fatty acids. The cycle starts with acetyl-CoA, the activated form of acetate, derived from glycolysis and pyruvate oxidation for carbohydrates and from beta oxidation of fatty acids. The two-carbon acetyl group in acetyl-CoA is transferred to the four-carbon compound of oxaloacetate to form the six-carbon compound of citrate. In a series of reactions two carbons in citrate are oxidized to CO2 and the reaction pathway supplies NADH for use in the oxidative phosphorylation and other metabolic processes. The pathway also supplies important precursor metabolites including 2-oxoglutarate. At the end of the cycle the remaining four-carbon part is transformed back to oxaloacetate. According to the genome sequence data, many organisms seem to lack genes for the full cycle [MD:M00009], but contain genes for specific segments [MD:M00010 M00011].
Class
Metabolism; Carbohydrate metabolism
Pathway map
maj00020  Citrate cycle (TCA cycle)
maj00020

Module
maj_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:maj00020]
maj_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:maj00020]
maj_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:maj00020]
maj_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:maj00020]
maj_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:maj00020]
Other DBs
GO: 0006099
Organism
Metarhizium robertsii [GN:maj]
Gene
MAA_01022  methylcitrate synthase precursor [KO:K01647] [EC:2.3.3.1]
MAA_01828  citrate-synthase [KO:K01647] [EC:2.3.3.1]
MAA_06270  peroxysomal citrate synthase [KO:K01647] [EC:2.3.3.1]
MAA_02559  beta subunit of ATP citrate lyase [KO:K01648] [EC:2.3.3.8]
MAA_02560  ATP-citrate synthase subunit 1 [KO:K01648] [EC:2.3.3.8]
MAA_04449  Aconitase-like core [KO:K01681] [EC:4.2.1.3]
MAA_03118  isocitrate dehydrogenase [KO:K00031] [EC:1.1.1.42]
MAA_07472  Isocitrate dehydrogenase [NAD] subunit 1, mitochondrial precursor [KO:K00030] [EC:1.1.1.41]
MAA_01213  isocitrate dehydrogenase, subunit 2, NAD-dependent, mitochondrial [KO:K00030] [EC:1.1.1.41]
MAA_05310  2-oxoglutarate dehydrogenase E1 component [KO:K00164] [EC:1.2.4.2]
MAA_04470  Dihydrolipoamide succinyltransferase [KO:K00658] [EC:2.3.1.61]
MAA_04490  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
MAA_04733  Succinyl-CoA ligase, alpha subunit [KO:K01899] [EC:6.2.1.4 6.2.1.5]
MAA_09274  hypothetical protein [KO:K01899] [EC:6.2.1.4 6.2.1.5]
MAA_02656  beta subunit of GDP-forming succinate-CoA ligase [KO:K01900] [EC:6.2.1.4 6.2.1.5]
MAA_10465  Succinyl-CoA synthetase, beta subunit [KO:K01900] [EC:6.2.1.4 6.2.1.5]
MAA_05673  Succinate dehydrogenase, flavoprotein subunit [KO:K00234] [EC:1.3.5.1]
MAA_03382  succinate dehydrogenase iron-sulfur protein [KO:K00235] [EC:1.3.5.1]
MAA_09741  hypothetical protein [KO:K00236]
MAA_07462  Cytochrome b, succinate dehydrogenase small subunit, CybS [KO:K00237]
MAA_03869  fumarate hydratase [KO:K01679] [EC:4.2.1.2]
MAA_05537  Malate dehydrogenase, type 1 [KO:K00026] [EC:1.1.1.37]
MAA_00516  Malate dehydrogenase, type 1 [KO:K00026] [EC:1.1.1.37]
MAA_04366  methylcrotonoyl-CoA carboxylase alpha chain [KO:K01958] [EC:6.4.1.1]
MAA_02289  phosphoenolpyruvate carboxykinase [KO:K01610] [EC:4.1.1.49]
MAA_03559  pyruvate dehydrogenase E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
MAA_08787  pyruvate dehydrogenase E1 component beta subunit [KO:K00162] [EC:1.2.4.1]
MAA_02750  pyruvate dehydrogenase complex, dihydrolipoamide acetyltransferase component [KO:K00627] [EC:2.3.1.12]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00026  2-Oxoglutarate
C00036  Oxaloacetate
C00042  Succinate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00091  Succinyl-CoA
C00122  Fumarate
C00149  (S)-Malate
C00158  Citrate
C00311  Isocitrate
C00417  cis-Aconitate
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C05379  Oxalosuccinate
C05381  3-Carboxy-1-hydroxypropyl-ThPP
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16254  [Dihydrolipoyllysine-residue succinyltransferase] S-succinyldihydrolipoyllysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
maj00010  Glycolysis / Gluconeogenesis
maj00053  Ascorbate and aldarate metabolism
maj00061  Fatty acid biosynthesis
maj00062  Fatty acid elongation
maj00071  Fatty acid degradation
maj00190  Oxidative phosphorylation
maj00220  Arginine biosynthesis
maj00250  Alanine, aspartate and glutamate metabolism
maj00280  Valine, leucine and isoleucine degradation
maj00350  Tyrosine metabolism
maj00470  D-Amino acid metabolism
maj00630  Glyoxylate and dicarboxylate metabolism
KO pathway
ko00020   
LinkDB

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