KEGG   PATHWAY: malg00030
Entry
malg00030                   Pathway                                
Name
Pentose phosphate pathway - Marinovum algicola
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
malg00030  Pentose phosphate pathway
malg00030

Module
malg_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:malg00030]
malg_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:malg00030]
malg_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:malg00030]
malg_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:malg00030]
Other DBs
GO: 0006098
Organism
Marinovum algicola [GN:malg]
Gene
MALG_02074  Glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
MALG_04928  Thermophilic glucose-6-phosphate isomerase [KO:K06859] [EC:5.3.1.9]
MALG_02076  glucose-6-phosphate 1-dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
MALG_02075  6-phosphogluconolactonase [KO:K01057] [EC:3.1.1.31]
MALG_04592  3-carboxymuconate cyclase [KO:K07404] [EC:3.1.1.31]
MALG_00384  ribulose-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
MALG_04574  Transketolase [KO:K00615] [EC:2.2.1.1]
MALG_04575  Transketolaseq [KO:K00615] [EC:2.2.1.1]
MALG_03989  transketolase [KO:K00615] [EC:2.2.1.1]
MALG_01944  transketolase [KO:K00615] [EC:2.2.1.1]
MALG_04974  transaldolase [KO:K00616] [EC:2.2.1.2]
MALG_03990  transaldolase [KO:K00616] [EC:2.2.1.2]
MALG_04333  transaldolase [KO:K00616] [EC:2.2.1.2]
MALG_04502  fructose-6-phosphate aldolase, TalC/MipB family [KO:K00616] [EC:2.2.1.2]
MALG_02196  ribose 5-phosphate isomerase [KO:K01807] [EC:5.3.1.6]
MALG_03451  deoxyribose-phosphate aldolase [KO:K01619] [EC:4.1.2.4]
MALG_03571  Sugar kinase, ribokinase family [KO:K00852] [EC:2.7.1.15]
MALG_00684  phosphopentomutase [KO:K01839] [EC:5.4.2.7]
MALG_01984  Phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
MALG_00334  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
MALG_02026  6-phosphogluconate dehydratase [KO:K01690] [EC:4.2.1.12]
MALG_02027  Entner-Doudoroff aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
MALG_04927  Entner-Doudoroff aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
MALG_03027  Choline dehydrogenase [KO:K19813] [EC:1.1.5.9]
MALG_04496  Gluconolactonase [KO:K01053] [EC:3.1.1.17]
MALG_00197  Sugar kinase, ribokinase family [KO:K00874] [EC:2.7.1.45]
MALG_03564  Putative glycerate kinase [KO:K11529] [EC:2.7.1.165]
MALG_02083  Fructose-1,6-bisphosphate aldolase [KO:K01623] [EC:4.1.2.13]
MALG_04896  5-keto-2-deoxy-D-gluconate-6 phosphate aldolase [KO:K01624] [EC:4.1.2.13]
MALG_04737  Fructose-1,6-bisphosphatase [KO:K03841] [EC:3.1.3.11]
MALG_00987  fructose-1,6-bisphosphatase, class II [KO:K11532] [EC:3.1.3.11 3.1.3.37]
MALG_00578  hexose kinase, 1-phosphofructokinase family [KO:K16370] [EC:2.7.1.11]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
malg00010  Glycolysis / Gluconeogenesis
malg00040  Pentose and glucuronate interconversions
malg00052  Galactose metabolism
malg00230  Purine metabolism
malg00240  Pyrimidine metabolism
malg00340  Histidine metabolism
malg00630  Glyoxylate and dicarboxylate metabolism
malg00750  Vitamin B6 metabolism
KO pathway
ko00030   
LinkDB

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