KEGG   PATHWAY: marz00630
Entry
marz00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Mycolicibacterium arabiense
Class
Metabolism; Carbohydrate metabolism
Pathway map
marz00630  Glyoxylate and dicarboxylate metabolism
marz00630

Module
marz_M00621  Glycine cleavage system [PATH:marz00630]
marz_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:marz00630]
Other DBs
GO: 0046487 0043648
Organism
Mycolicibacterium arabiense [GN:marz]
Gene
MARA_23120  aceA_1; isocitrate lyase [KO:K01637] [EC:4.1.3.1]
MARA_31660  aceA_2; isocitrate lyase [KO:K01637] [EC:4.1.3.1]
MARA_46360  hypothetical protein [KO:K01895] [EC:6.2.1.1]
MARA_50880  hypothetical protein [KO:K01895] [EC:6.2.1.1]
MARA_00950  acsA_1; acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
MARA_01970  acsA_2; acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
MARA_02380  hypothetical protein [KO:K01895] [EC:6.2.1.1]
MARA_09950  glcB_2; malate synthase G [KO:K01638] [EC:2.3.3.9]
MARA_00860  glcB_1; malate synthase G [KO:K01638] [EC:2.3.3.9]
MARA_50610  citrate synthase [KO:K01647] [EC:2.3.3.1]
MARA_50660  gltA; citrate synthase [KO:K01647] [EC:2.3.3.1]
MARA_13310  acnA; aconitate hydratase A [KO:K01681] [EC:4.2.1.3]
MARA_09680  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
MARA_20850  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
MARA_29820  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
MARA_35380  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
MARA_47610  fadA6; acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
MARA_47750  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
MARA_48610  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
MARA_50140  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
MARA_51110  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
MARA_51730  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
MARA_53960  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
MARA_57030  putative acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
MARA_48140  methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
MARA_57020  mce; methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
MARA_24700  acetyl-/propionyl-CoA carboxylase subunit alpha [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.3.4.14]
MARA_24630  propionyl-CoA carboxylase subunit beta [KO:K27094] [EC:6.4.1.3 6.4.1.- 2.1.3.15]
MARA_24640  hypothetical protein [KO:K27095]
MARA_61330  propionyl-CoA carboxylase subunit beta [KO:K18472] [EC:6.4.1.2 6.4.1.3 2.1.3.15]
MARA_13150  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
MARA_13160  mutA; methylmalonyl-CoA mutase small subunit [KO:K01847] [EC:5.4.99.2]
MARA_57450  methylmalonyl-CoA mutase [KO:K01849] [EC:5.4.99.2]
MARA_57440  methylmalonyl-CoA mutase [KO:K01848] [EC:5.4.99.2]
MARA_55840  FAD-linked oxidase [KO:K00104] [EC:1.1.99.14]
MARA_00890  putative oxidoreductase [KO:K00104] [EC:1.1.99.14]
MARA_01920  FAD-linked oxidase [KO:K00104] [EC:1.1.99.14]
MARA_39930  katA_1; catalase [KO:K03781] [EC:1.11.1.6]
MARA_41640  catalase-related peroxidase [KO:K03781] [EC:1.11.1.6]
MARA_45850  katA_2; catalase [KO:K03781] [EC:1.11.1.6]
MARA_35620  D-glycerate dehydrogenase [KO:K00015] [EC:1.1.1.26]
MARA_36200  putative haloacid dehalogenase-like hydrolase [KO:K01091] [EC:3.1.3.18]
MARA_04540  5'-nucleotidase [KO:K01091] [EC:3.1.3.18]
MARA_17780  glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
MARA_35440  glnA3; glutamine synthetase GlnA [KO:K01915] [EC:6.3.1.2]
MARA_45760  glnT; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
MARA_59430  glnN; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
MARA_04690  glnA_1; putative glutamine synthetase 2 [KO:K01915] [EC:6.3.1.2]
MARA_04760  glnA_2; glutamine synthetase 1 [KO:K01915] [EC:6.3.1.2]
MARA_54190  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
MARA_09970  gcvP; glycine dehydrogenase (decarboxylating) [KO:K00281] [EC:1.4.4.2]
MARA_04870  gcvT; aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
MARA_31710  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
MARA_10020  gcvH; glycine cleavage system H protein [KO:K02437]
MARA_53030  hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
MARA_35600  glxK; glycerate kinase [KO:K00865] [EC:2.7.1.165]
MARA_04940  hypothetical protein [KO:K00865] [EC:2.7.1.165]
MARA_34940  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
MARA_35750  dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
MARA_40650  eda; 2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
MARA_55700  kgd; multifunctional 2-oxoglutarate metabolism enzyme [KO:K01616] [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
marz00010  Glycolysis / Gluconeogenesis
marz00020  Citrate cycle (TCA cycle)
marz00030  Pentose phosphate pathway
marz00053  Ascorbate and aldarate metabolism
marz00071  Fatty acid degradation
marz00230  Purine metabolism
marz00250  Alanine, aspartate and glutamate metabolism
marz00260  Glycine, serine and threonine metabolism
marz00620  Pyruvate metabolism
marz00710  Carbon fixation by Calvin cycle
marz00750  Vitamin B6 metabolism
marz00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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