KEGG   PATHWAY: mbur00630
Entry
mbur00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Methylotuvimicrobium buryatense
Class
Metabolism; Carbohydrate metabolism
Pathway map
mbur00630  Glyoxylate and dicarboxylate metabolism
mbur00630

Module
mbur_M00621  Glycine cleavage system [PATH:mbur00630]
Other DBs
GO: 0046487 0043648
Organism
Methylotuvimicrobium buryatense [GN:mbur]
Gene
EQU24_07820  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
EQU24_04575  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
EQU24_06010  citrate synthase [KO:K01647] [EC:2.3.3.1]
EQU24_06100  gltA; citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
EQU24_19870  acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
EQU24_06015  acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
EQU24_04640  sucD; succinate--CoA ligase subunit alpha [KO:K08692] [EC:6.2.1.9]
EQU24_04635  malate--CoA ligase subunit beta [KO:K14067] [EC:6.2.1.9]
EQU24_04630  CoA ester lyase [KO:K08691] [EC:4.1.3.24 4.1.3.25]
EQU24_13600  FAD-binding protein [KO:K00104] [EC:1.1.99.14]
EQU24_13605  glcE; glycolate oxidase subunit GlcE [KO:K11472] [EC:1.1.99.14]
EQU24_13610  glcF; glycolate oxidase subunit GlcF [KO:K11473] [EC:1.1.99.14]
EQU24_17310  (Fe-S)-binding protein [KO:K11473] [EC:1.1.99.14]
EQU24_14750  catalase [KO:K03781] [EC:1.11.1.6]
EQU24_04860  HAD-IIIA family hydrolase [KO:K01091] [EC:3.1.3.18]
EQU24_04625  aminotransferase class V-fold PLP-dependent enzyme [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
EQU24_07185  glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
EQU24_04560  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
EQU24_16745  gcvP; glycine dehydrogenase (aminomethyl-transferring) [KO:K00281] [EC:1.4.4.2]
EQU24_16740  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
EQU24_11665  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
EQU24_06085  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
EQU24_09360  gcvH; glycine cleavage system protein GcvH [KO:K02437]
EQU24_06520  hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
EQU24_04565  glycerate kinase [KO:K11529] [EC:2.7.1.165]
EQU24_06105  eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
EQU24_01455  formate dehydrogenase [KO:K00126] [EC:1.17.1.9]
EQU24_01465  formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
EQU24_11515  formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
EQU24_11510  NADH-quinone oxidoreductase subunit F [KO:K22515] [EC:1.17.1.9]
EQU24_01470  NADH-quinone oxidoreductase subunit NuoF [KO:K00124]
EQU24_01475  formate dehydrogenase subunit gamma [KO:K00127]
EQU24_08475  acetamidase/formamidase family protein [KO:K01455] [EC:3.5.1.49]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
mbur00010  Glycolysis / Gluconeogenesis
mbur00020  Citrate cycle (TCA cycle)
mbur00030  Pentose phosphate pathway
mbur00053  Ascorbate and aldarate metabolism
mbur00071  Fatty acid degradation
mbur00230  Purine metabolism
mbur00250  Alanine, aspartate and glutamate metabolism
mbur00260  Glycine, serine and threonine metabolism
mbur00620  Pyruvate metabolism
mbur00710  Carbon fixation by Calvin cycle
mbur00750  Vitamin B6 metabolism
mbur00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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