KEGG   PATHWAY: mesw00630
Entry
mesw00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Mesorhizobium sp. WSM1497
Class
Metabolism; Carbohydrate metabolism
Pathway map
mesw00630  Glyoxylate and dicarboxylate metabolism
mesw00630

Module
mesw_M00012  Glyoxylate cycle [PATH:mesw00630]
mesw_M00621  Glycine cleavage system [PATH:mesw00630]
mesw_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:mesw00630]
Other DBs
GO: 0046487 0043648
Organism
Mesorhizobium sp. WSM1497 [GN:mesw]
Gene
A9K65_012660  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
A9K65_006015  acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
A9K65_003795  malate synthase G [KO:K01638] [EC:2.3.3.9]
A9K65_005100  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
A9K65_022140  citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
A9K65_006845  citrate synthase [KO:K01647] [EC:2.3.3.1]
A9K65_006850  citrate synthase/methylcitrate synthase [KO:K01647] [EC:2.3.3.1]
A9K65_005010  aconitate hydratase [KO:K01681] [EC:4.2.1.3]
A9K65_027060  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
A9K65_032195  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
A9K65_006835  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
A9K65_006830  beta-ketoacyl-ACP reductase [KO:K00023] [EC:1.1.1.36]
A9K65_017860  methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
A9K65_031175  acyl-CoA dehydrogenase [KO:K14448] [EC:1.3.8.12]
A9K65_023150  acetyl/propionyl-CoA carboxylase subunit alpha [KO:K01965] [EC:6.4.1.3]
A9K65_019730  methylmalonyl-CoA carboxyltransferase [KO:K01966] [EC:6.4.1.3 2.1.3.15]
A9K65_027030  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
A9K65_027035  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
A9K65_030880  methylaspartate ammonia-lyase [KO:K04835] [EC:4.3.1.2]
A9K65_013195  FAD-binding oxidoreductase [KO:K00104] [EC:1.1.99.14]
A9K65_013205  2-hydroxy-acid oxidase [KO:K11472] [EC:1.1.99.14]
A9K65_013210  glycolate oxidase iron-sulfur subunit [KO:K11473] [EC:1.1.99.14]
A9K65_029805  catalase HPII [KO:K03781] [EC:1.11.1.6]
A9K65_000030  D-glycerate dehydrogenase [KO:K00015] [EC:1.1.1.26]
A9K65_000360  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
A9K65_020980  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
A9K65_020555  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
A9K65_000585  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
A9K65_023760  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
A9K65_023735  rbcL; ribulose-bisphosphate carboxylase large subunit [KO:K01601] [EC:4.1.1.39]
A9K65_023740  ribulose bisphosphate carboxylase small subunit [KO:K01602] [EC:4.1.1.39]
A9K65_010645  serine--glyoxylate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
A9K65_009615  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
A9K65_005635  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
A9K65_001800  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
A9K65_028385  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
A9K65_019705  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
A9K65_019710  type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
A9K65_012640  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
A9K65_013020  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
A9K65_024730  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
A9K65_010655  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
A9K65_023210  glycine dehydrogenase (aminomethyl-transferring) [KO:K00281] [EC:1.4.4.2]
A9K65_003500  glycine cleavage system protein T [KO:K00605] [EC:2.1.2.10]
A9K65_023200  glycine cleavage system aminomethyltransferase T [KO:K00605] [EC:2.1.2.10]
A9K65_010630  glycine cleavage system protein T [KO:K00605] [EC:2.1.2.10]
A9K65_028215  aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
A9K65_028290  aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
A9K65_005140  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
A9K65_004570  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
A9K65_019880  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
A9K65_023205  glycine cleavage system protein H [KO:K02437]
A9K65_019365  glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
A9K65_019370  hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
A9K65_019375  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
A9K65_001815  glycerate kinase [KO:K11529] [EC:2.7.1.165]
A9K65_020940  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
A9K65_020970  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
A9K65_009920  keto-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
A9K65_000680  formate dehydrogenase [KO:K00126] [EC:1.17.1.9]
A9K65_000670  formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
A9K65_021290  formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
A9K65_021400  formate dehydrogenase [KO:K00123] [EC:1.17.1.9]
A9K65_021295  NADH-quinone oxidoreductase subunit F [KO:K22515] [EC:1.17.1.9]
A9K65_000665  formate dehydrogenase [KO:K00124]
A9K65_021405  formate dehydrogenase [KO:K00124]
A9K65_000660  formate dehydrogenase subunit gamma [KO:K00127]
A9K65_021410  formate dehydrogenase subunit gamma [KO:K00127]
A9K65_029415  esterase [KO:K01432] [EC:3.5.1.9]
A9K65_022105  alpha/beta hydrolase [KO:K01432] [EC:3.5.1.9]
A9K65_016425  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
A9K65_010640  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
A9K65_024995  N-formylglutamate deformylase [KO:K01458] [EC:3.5.1.68]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
mesw00010  Glycolysis / Gluconeogenesis
mesw00020  Citrate cycle (TCA cycle)
mesw00030  Pentose phosphate pathway
mesw00053  Ascorbate and aldarate metabolism
mesw00071  Fatty acid degradation
mesw00230  Purine metabolism
mesw00250  Alanine, aspartate and glutamate metabolism
mesw00260  Glycine, serine and threonine metabolism
mesw00620  Pyruvate metabolism
mesw00710  Carbon fixation by Calvin cycle
mesw00750  Vitamin B6 metabolism
mesw00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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