KEGG   PATHWAY: mfeu00630
Entry
mfeu00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Micromonospora ferruginea
Class
Metabolism; Carbohydrate metabolism
Pathway map
mfeu00630  Glyoxylate and dicarboxylate metabolism
mfeu00630

Module
mfeu_M00621  Glycine cleavage system [PATH:mfeu00630]
Other DBs
GO: 0046487 0043648
Organism
Micromonospora ferruginea [GN:mfeu]
Gene
H1D33_08925  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
H1D33_02315  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
H1D33_09365  citrate synthase 2 [KO:K01647] [EC:2.3.3.1]
H1D33_19330  citrate synthase [KO:K01647] [EC:2.3.3.1]
H1D33_26920  aconitate hydratase [KO:K01681] [EC:4.2.1.3]
H1D33_07795  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
H1D33_01015  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
H1D33_21345  steroid 3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
H1D33_11170  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
H1D33_01020  mce; methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
H1D33_01100  protein meaA [KO:K14447] [EC:5.4.99.63]
H1D33_10760  biotin carboxylase N-terminal domain-containing protein [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.3.4.14]
H1D33_10850  acyl-CoA carboxylase subunit beta [KO:K27094] [EC:6.4.1.3 6.4.1.- 2.1.3.15]
H1D33_10655  methylmalonyl-CoA mutase family protein [KO:K01848] [EC:5.4.99.2]
H1D33_04600  FAD-linked oxidase C-terminal domain-containing protein [KO:K00104] [EC:1.1.99.14]
H1D33_08415  FAD-binding oxidoreductase [KO:K11472] [EC:1.1.99.14]
H1D33_16315  catalase [KO:K03781] [EC:1.11.1.6]
H1D33_09285  haloacid dehalogenase-like hydrolase [KO:K01091] [EC:3.1.3.18]
H1D33_28745  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
H1D33_28675  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
H1D33_18635  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
H1D33_14060  glutamine synthetase family protein [KO:K01915] [EC:6.3.1.2]
H1D33_01215  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
H1D33_22905  glycine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
H1D33_21660  gcvP; aminomethyl-transferring glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
H1D33_28560  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
H1D33_28575  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
H1D33_21710  gcvH; glycine cleavage system protein GcvH [KO:K02437]
H1D33_28485  glycerate kinase [KO:K00865] [EC:2.7.1.165]
H1D33_20595  glycerate kinase [KO:K00865] [EC:2.7.1.165]
H1D33_23275  bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
H1D33_01605  multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit [KO:K01616] [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
H1D33_12285  oxalate decarboxylase family bicupin [KO:K01569] [EC:4.1.1.2]
H1D33_21815  fdh; formate dehydrogenase [KO:K00123] [EC:1.17.1.9]
H1D33_21810  4Fe-4S dicluster domain-containing protein [KO:K00124]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
mfeu00010  Glycolysis / Gluconeogenesis
mfeu00020  Citrate cycle (TCA cycle)
mfeu00030  Pentose phosphate pathway
mfeu00053  Ascorbate and aldarate metabolism
mfeu00071  Fatty acid degradation
mfeu00230  Purine metabolism
mfeu00250  Alanine, aspartate and glutamate metabolism
mfeu00260  Glycine, serine and threonine metabolism
mfeu00620  Pyruvate metabolism
mfeu00710  Carbon fixation by Calvin cycle
mfeu00750  Vitamin B6 metabolism
mfeu00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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