KEGG   PATHWAY: namp00970
Entry
namp00970                   Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Nosocomiicoccus ampullae
Class
Genetic Information Processing; Translation
Pathway map
namp00970  Aminoacyl-tRNA biosynthesis
namp00970

Organism
Nosocomiicoccus ampullae [GN:namp]
Gene
KPF49_05810  tRNA-Ala [KO:K14218]
KPF49_05865  tRNA-Ala [KO:K14218]
KPF49_05820  tRNA-Arg [KO:K14219]
KPF49_04680  tRNA-Arg [KO:K14219]
KPF49_01410  tRNA-Arg [KO:K14219]
KPF49_00895  tRNA-Asn [KO:K14220]
KPF49_05415  tRNA-Asn [KO:K14220]
KPF49_05450  tRNA-Asn [KO:K14220]
KPF49_00090  tRNA-Asp [KO:K14221]
KPF49_05430  tRNA-Asp [KO:K14221]
KPF49_05785  tRNA-Asp [KO:K14221]
KPF49_05750  tRNA-Cys [KO:K14222]
KPF49_00915  tRNA-Gln [KO:K14223]
KPF49_05755  tRNA-Gln [KO:K14223]
KPF49_00085  tRNA-Glu [KO:K14224]
KPF49_00900  tRNA-Glu [KO:K14224]
KPF49_05455  tRNA-Glu [KO:K14224]
KPF49_05830  tRNA-Gly [KO:K14225]
KPF49_07440  tRNA-Gly [KO:K14225]
KPF49_05445  tRNA-Gly [KO:K14225]
KPF49_06440  tRNA-Gly [KO:K14225]
KPF49_05745  tRNA-OTHER [KO:K14225]
KPF49_05440  tRNA-His [KO:K14226]
KPF49_05760  tRNA-His [KO:K14226]
KPF49_05870  tRNA-Ile [KO:K14227]
KPF49_07435  tRNA-Ile [KO:K14227]
KPF49_05825  tRNA-Leu [KO:K14228]
KPF49_05835  tRNA-Leu [KO:K14228]
KPF49_06445  tRNA-Leu [KO:K14228]
KPF49_05740  tRNA-Leu [KO:K14228]
KPF49_00920  tRNA-Lys [KO:K14229]
KPF49_05840  tRNA-Lys [KO:K14229]
KPF49_05425  tRNA-Met [KO:K14230]
KPF49_05790  tRNA-Met [KO:K14230]
KPF49_05800  tRNA-Ile [KO:K14230]
KPF49_05805  tRNA-Met [KO:K14230]
KPF49_05435  tRNA-Phe [KO:K14231]
KPF49_05780  tRNA-Phe [KO:K14231]
KPF49_05815  tRNA-Pro [KO:K14232]
KPF49_05795  tRNA-Ser [KO:K14233]
KPF49_05460  tRNA-Ser [KO:K14233]
KPF49_05410  tRNA-Ser [KO:K14233]
KPF49_05775  tRNA-Thr [KO:K14234]
KPF49_05845  tRNA-Thr [KO:K14234]
KPF49_05765  tRNA-Trp [KO:K14235]
KPF49_00910  tRNA-Tyr [KO:K14236]
KPF49_05770  tRNA-Tyr [KO:K14236]
KPF49_07445  tRNA-Val [KO:K14237]
KPF49_00905  tRNA-Val [KO:K14237]
KPF49_05850  tRNA-Val [KO:K14237]
KPF49_07370  gltX; glutamate--tRNA ligase [KO:K09698] [EC:6.1.1.24]
KPF49_06070  gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA [KO:K02433] [EC:6.3.5.6 6.3.5.7]
KPF49_06065  gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB [KO:K02434] [EC:6.3.5.6 6.3.5.7]
KPF49_06075  gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC [KO:K02435] [EC:6.3.5.6 6.3.5.7]
KPF49_03480  alaS; alanine--tRNA ligase [KO:K01872] [EC:6.1.1.7]
KPF49_03400  aspS; aspartate--tRNA ligase [KO:K01876] [EC:6.1.1.12]
KPF49_03695  glycine--tRNA ligase [KO:K01880] [EC:6.1.1.14]
KPF49_04790  thrS; threonine--tRNA ligase [KO:K01868] [EC:6.1.1.3]
KPF49_00055  serS; serine--tRNA ligase [KO:K01875] [EC:6.1.1.11]
KPF49_07360  cysS; cysteine--tRNA ligase [KO:K01883] [EC:6.1.1.16]
KPF49_07630  metG; methionine--tRNA ligase [KO:K01874] [EC:6.1.1.10]
KPF49_02575  fmt; methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
KPF49_04610  valine--tRNA ligase [KO:K01873] [EC:6.1.1.9]
KPF49_05180  leuS; leucine--tRNA ligase [KO:K01869] [EC:6.1.1.4]
KPF49_02500  ileS; isoleucine--tRNA ligase [KO:K01870] [EC:6.1.1.5]
KPF49_07450  lysS; lysine--tRNA ligase [KO:K04567] [EC:6.1.1.6]
KPF49_07135  argS; arginine--tRNA ligase [KO:K01887] [EC:6.1.1.19]
KPF49_02985  proline--tRNA ligase [KO:K01881] [EC:6.1.1.15]
KPF49_03395  hisS; histidine--tRNA ligase [KO:K01892] [EC:6.1.1.21]
KPF49_04755  pheS; phenylalanine--tRNA ligase subunit alpha [KO:K01889] [EC:6.1.1.20]
KPF49_04750  pheT; phenylalanine--tRNA ligase subunit beta [KO:K01890] [EC:6.1.1.20]
KPF49_05040  tyrS; tyrosine--tRNA ligase [KO:K01866] [EC:6.1.1.1]
KPF49_01925  trpS; tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
namp00250  Alanine, aspartate and glutamate metabolism
namp00260  Glycine, serine and threonine metabolism
namp00270  Cysteine and methionine metabolism
namp00290  Valine, leucine and isoleucine biosynthesis
namp00300  Lysine biosynthesis
namp00330  Arginine and proline metabolism
namp00340  Histidine metabolism
namp00380  Tryptophan metabolism
namp00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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