KEGG   PATHWAY: neo00010
Entry
neo00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Neorhizobium sp. SOG26
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
neo00010  Glycolysis / Gluconeogenesis
neo00010

Module
neo_M00002  Glycolysis, core module involving three-carbon compounds [PATH:neo00010]
neo_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:neo00010]
Other DBs
GO: 0006096 0006094
Organism
Neorhizobium sp. SOG26 [GN:neo]
Gene
CYG48_15990  glucokinase [KO:K00845] [EC:2.7.1.2]
CYG48_00405  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
CYG48_08480  pyrophosphate--fructose-6-phosphate 1-phosphotransferase [KO:K00895] [EC:2.7.1.90]
CYG48_10770  fructose bisphosphate aldolase [KO:K01623] [EC:4.1.2.13]
CYG48_07680  triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
CYG48_10755  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
CYG48_10765  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
CYG48_15980  2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
CYG48_08090  phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
CYG48_10895  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
CYG48_02340  pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
CYG48_08080  pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
CYG48_08075  pyruvate dehydrogenase complex E1 component subunit beta [KO:K00162] [EC:1.2.4.1]
CYG48_08070  pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase [KO:K00627] [EC:2.3.1.12]
CYG48_13590  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
CYG48_10375  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
CYG48_08060  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
CYG48_07870  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
CYG48_12450  alcohol dehydrogenase [KO:K00001] [EC:1.1.1.1]
CYG48_19160  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
CYG48_14950  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
CYG48_12655  AMP-dependent synthetase [KO:K01895] [EC:6.2.1.1]
CYG48_14065  galactose-1-epimerase [KO:K01785] [EC:5.1.3.3]
CYG48_11145  alpha-D-glucose phosphate-specific phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
CYG48_15195  phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
neo00020  Citrate cycle (TCA cycle)
neo00030  Pentose phosphate pathway
neo00500  Starch and sucrose metabolism
neo00620  Pyruvate metabolism
neo00640  Propanoate metabolism
KO pathway
ko00010   
LinkDB

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