KEGG   PATHWAY: nneo00010
Entry
nneo00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Candidatus Nitrospira neomarina
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
nneo00010  Glycolysis / Gluconeogenesis
nneo00010

Module
nneo_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:nneo00010]
nneo_M00002  Glycolysis, core module involving three-carbon compounds [PATH:nneo00010]
nneo_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:nneo00010]
Other DBs
GO: 0006096 0006094
Organism
Candidatus Nitrospira neomarina [GN:nneo]
Gene
PQG83_17190  glk; glucokinase [KO:K00845] [EC:2.7.1.2]
PQG83_04005  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
PQG83_19625  bifunctional transaldolase/phosoglucose isomerase [KO:K13810] [EC:2.2.1.2 5.3.1.9]
PQG83_00055  pfp; diphosphate--fructose-6-phosphate 1-phosphotransferase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
PQG83_03840  fbp; class 1 fructose-bisphosphatase [KO:K03841] [EC:3.1.3.11]
PQG83_03865  class I fructose-bisphosphate aldolase [KO:K11645] [EC:4.1.2.13]
PQG83_00615  fbp; fructose-1,6-bisphosphate aldolase/phosphatase [KO:K01622] [EC:4.1.2.13 3.1.3.11]
PQG83_18925  tpiA; triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
PQG83_18935  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
PQG83_18930  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
PQG83_11535  2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
PQG83_14970  2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
PQG83_05135  CMP-5'-phosphonoformate--3-phosphoglycerate phosphonoformyl transferase [KO:K15635] [EC:5.4.2.12]
PQG83_12405  hypothetical protein [KO:K15635] [EC:5.4.2.12]
PQG83_05140  hypothetical protein [KO:K01689] [EC:4.2.1.11]
PQG83_05970  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
PQG83_16310  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
PQG83_19255  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
PQG83_09280  ppdK; pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
PQG83_00230  ppsA; phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
PQG83_10275  pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
PQG83_10270  pyruvate dehydrogenase complex E1 component subunit beta [KO:K00162] [EC:1.2.4.1]
PQG83_10265  dihydrolipoamide acetyltransferase family protein [KO:K00627] [EC:2.3.1.12]
PQG83_06640  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
PQG83_13515  transketolase C-terminal domain-containing protein [KO:K00169] [EC:1.2.7.1]
PQG83_13785  transketolase C-terminal domain-containing protein [KO:K00169] [EC:1.2.7.1]
PQG83_20720  porA; pyruvate ferredoxin oxidoreductase [KO:K00169] [EC:1.2.7.1]
PQG83_13510  thiamine pyrophosphate-dependent enzyme [KO:K00170] [EC:1.2.7.1]
PQG83_13805  thiamine pyrophosphate-dependent enzyme [KO:K00170] [EC:1.2.7.1]
PQG83_20725  thiamine pyrophosphate-dependent enzyme [KO:K00170] [EC:1.2.7.1]
PQG83_13505  2-oxoacid:acceptor oxidoreductase family protein [KO:K00172] [EC:1.2.7.1]
PQG83_13800  2-oxoacid:acceptor oxidoreductase family protein [KO:K00172] [EC:1.2.7.1]
PQG83_20715  2-oxoacid:acceptor oxidoreductase family protein [KO:K00172] [EC:1.2.7.1]
PQG83_13500  pyruvate ferredoxin oxidoreductase [KO:K00171] [EC:1.2.7.1]
PQG83_00945  zinc-dependent alcohol dehydrogenase family protein [KO:K13953] [EC:1.1.1.1]
PQG83_07125  NAD(P)-dependent alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
PQG83_08485  NAD(P)-dependent alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
PQG83_05765  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
PQG83_08035  pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) [KO:K01835] [EC:5.4.2.2]
PQG83_03835  phosphomannomutase/phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
PQG83_12025  ROK family protein [KO:K00886] [EC:2.7.1.63]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
nneo00020  Citrate cycle (TCA cycle)
nneo00030  Pentose phosphate pathway
nneo00500  Starch and sucrose metabolism
nneo00620  Pyruvate metabolism
nneo00640  Propanoate metabolism
nneo00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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