KEGG   PATHWAY: nok00970
Entry
nok00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Noviherbaspirillum sp. UKPF54
Class
Genetic Information Processing; Translation
Pathway map
nok00970  Aminoacyl-tRNA biosynthesis
nok00970

Organism
Noviherbaspirillum sp. UKPF54 [GN:nok]
Gene
FAY22_10925  tRNA-Ala [KO:K14218]
FAY22_12100  tRNA-Ala [KO:K14218]
FAY22_19350  tRNA-Ala [KO:K14218]
FAY22_21295  tRNA-Ala [KO:K14218]
FAY22_01830  tRNA-Arg [KO:K14219]
FAY22_10425  tRNA-Arg [KO:K14219]
FAY22_19140  tRNA-Arg [KO:K14219]
FAY22_02910  tRNA-Arg [KO:K14219]
FAY22_09105  tRNA-Arg [KO:K14219]
FAY22_03725  tRNA-Asn [KO:K14220]
FAY22_04920  tRNA-Asn [KO:K14220]
FAY22_07375  tRNA-Asp [KO:K14221]
FAY22_19070  tRNA-Asp [KO:K14221]
FAY22_05915  tRNA-Cys [KO:K14222]
FAY22_14475  tRNA-Gln [KO:K14223]
FAY22_10915  tRNA-Glu [KO:K14224]
FAY22_10920  tRNA-Glu [KO:K14224]
FAY22_13150  tRNA-Gly [KO:K14225]
FAY22_20505  tRNA-Gly [KO:K14225]
FAY22_03585  tRNA-Gly [KO:K14225]
FAY22_05905  tRNA-Gly [KO:K14225]
FAY22_05910  tRNA-Gly [KO:K14225]
FAY22_03530  tRNA-His [KO:K14226]
FAY22_19345  tRNA-Ile [KO:K14227]
FAY22_21290  tRNA-Ile [KO:K14227]
FAY22_07340  tRNA-Leu [KO:K14228]
FAY22_10005  tRNA-Leu [KO:K14228]
FAY22_09545  tRNA-Leu [KO:K14228]
FAY22_10610  tRNA-Leu [KO:K14228]
FAY22_12295  tRNA-Leu [KO:K14228]
FAY22_10605  tRNA-Leu [KO:K14228]
FAY22_05920  tRNA-Leu [KO:K14228]
FAY22_11880  tRNA-Lys [KO:K14229]
FAY22_04370  tRNA-Lys [KO:K14229]
FAY22_00185  tRNA-Met [KO:K14230]
FAY22_00385  tRNA-Met [KO:K14230]
FAY22_02020  tRNA-Met [KO:K14230]
FAY22_03015  tRNA-Met [KO:K14230]
FAY22_21190  tRNA-Phe [KO:K14231]
FAY22_09800  tRNA-Pro [KO:K14232]
FAY22_13705  tRNA-Pro [KO:K14232]
FAY22_10430  tRNA-Pro [KO:K14232]
FAY22_05500  tRNA-Ser [KO:K14233]
FAY22_09480  tRNA-Ser [KO:K14233]
FAY22_03565  tRNA-Ser [KO:K14233]
FAY22_10715  tRNA-Ser [KO:K14233]
FAY22_11900  tRNA-Thr [KO:K14234]
FAY22_00905  tRNA-Thr [KO:K14234]
FAY22_21135  tRNA-Thr [KO:K14234]
FAY22_20510  tRNA-Thr [KO:K14234]
FAY22_20520  tRNA-Trp [KO:K14235]
FAY22_20500  tRNA-Tyr [KO:K14236]
FAY22_04840  tRNA-Val [KO:K14237]
FAY22_07370  tRNA-Val [KO:K14237]
FAY22_03580  tRNA-Val [KO:K14237]
FAY22_09860  tRNA-Val [KO:K14237]
FAY22_10930  glutamate--tRNA ligase [KO:K01885] [EC:6.1.1.17]
FAY22_15300  gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA [KO:K02433] [EC:6.3.5.6 6.3.5.7]
FAY22_07420  amidase [KO:K02433] [EC:6.3.5.6 6.3.5.7]
FAY22_15310  gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB [KO:K02434] [EC:6.3.5.6 6.3.5.7]
FAY22_15295  gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC [KO:K02435] [EC:6.3.5.6 6.3.5.7]
FAY22_02080  glutamine--tRNA ligase/YqeY domain fusion protein [KO:K01886] [EC:6.1.1.18]
FAY22_02170  alaS; alanine--tRNA ligase [KO:K01872] [EC:6.1.1.7]
FAY22_14340  aspS; aspartate--tRNA ligase [KO:K01876] [EC:6.1.1.12]
FAY22_00130  glyQ; glycine--tRNA ligase subunit alpha [KO:K01878] [EC:6.1.1.14]
FAY22_00125  glycine--tRNA ligase subunit beta [KO:K01879] [EC:6.1.1.14]
FAY22_09855  thrS; threonine--tRNA ligase [KO:K01868] [EC:6.1.1.3]
FAY22_10725  serS; serine--tRNA ligase [KO:K01875] [EC:6.1.1.11]
FAY22_09505  cysteine--tRNA ligase [KO:K01883] [EC:6.1.1.16]
FAY22_10940  metG; methionine--tRNA ligase [KO:K01874] [EC:6.1.1.10]
FAY22_15520  methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
FAY22_05320  formyltransferase [KO:K00604] [EC:2.1.2.9]
FAY22_21580  valine--tRNA ligase [KO:K01873] [EC:6.1.1.9]
FAY22_13110  leucine--tRNA ligase [KO:K01869] [EC:6.1.1.4]
FAY22_11360  ileS; isoleucine--tRNA ligase [KO:K01870] [EC:6.1.1.5]
FAY22_04995  lysS; lysine--tRNA ligase [KO:K04567] [EC:6.1.1.6]
FAY22_19650  arginine--tRNA ligase [KO:K01887] [EC:6.1.1.19]
FAY22_13665  proline--tRNA ligase [KO:K01881] [EC:6.1.1.15]
FAY22_09600  hisS; histidine--tRNA ligase [KO:K01892] [EC:6.1.1.21]
FAY22_09835  pheS; phenylalanine--tRNA ligase subunit alpha [KO:K01889] [EC:6.1.1.20]
FAY22_09830  phenylalanine--tRNA ligase subunit beta [KO:K01890] [EC:6.1.1.20]
FAY22_21515  tyrosine--tRNA ligase [KO:K01866] [EC:6.1.1.1]
FAY22_18570  trpS; tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
FAY22_05180  tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
nok00250  Alanine, aspartate and glutamate metabolism
nok00260  Glycine, serine and threonine metabolism
nok00270  Cysteine and methionine metabolism
nok00290  Valine, leucine and isoleucine biosynthesis
nok00300  Lysine biosynthesis
nok00330  Arginine and proline metabolism
nok00340  Histidine metabolism
nok00380  Tryptophan metabolism
nok00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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