KEGG   PATHWAY: npy00010
Entry
npy00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Candidatus Nitrosymbiomonas proteolyticus
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
npy00010  Glycolysis / Gluconeogenesis
npy00010

Module
npy_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:npy00010]
npy_M00002  Glycolysis, core module involving three-carbon compounds [PATH:npy00010]
npy_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:npy00010]
Other DBs
GO: 0006096 0006094
Organism
Candidatus Nitrosymbiomonas proteolyticus [GN:npy]
Gene
NPRO_22760  glucokinase [KO:K25026] [EC:2.7.1.2]
NPRO_25480  bifunctional phosphoglucose/phosphomannose isomerase [KO:K15916] [EC:5.3.1.9 5.3.1.8]
NPRO_09400  6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
NPRO_08960  phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
NPRO_04530  fructose-bisphosphate aldolase [KO:K11645] [EC:4.1.2.13]
NPRO_23210  triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
NPRO_14680  type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
NPRO_19070  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
NPRO_18510  phosphoglyceromutase [KO:K01834] [EC:5.4.2.11]
NPRO_11730  histidine phosphatase superfamily [KO:K15634] [EC:5.4.2.11]
NPRO_18080  homoserine kinase [KO:K15635] [EC:5.4.2.12]
NPRO_04760  enolase [KO:K01689] [EC:4.2.1.11]
NPRO_09200  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
NPRO_16280  pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
NPRO_13460  pyruvate dehydrogenase E1 subunit alpha [KO:K00161] [EC:1.2.4.1]
NPRO_13450  pyruvate dehydrogenase E1 subunit beta [KO:K00162] [EC:1.2.4.1]
NPRO_21250  hypothetical conserved protein [KO:K00627] [EC:2.3.1.12]
NPRO_22780  pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase [KO:K00627] [EC:2.3.1.12]
NPRO_03600  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
NPRO_12970  2-oxoacid:acceptor oxidoreductase subunit alpha [KO:K00174] [EC:1.2.7.3 1.2.7.11]
NPRO_12960  2-oxoglutarate oxidoreductase subunit KorB [KO:K00175] [EC:1.2.7.3 1.2.7.11]
NPRO_09470  malate/lactate dehydrogenase [KO:K00016] [EC:1.1.1.27]
NPRO_12630  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
NPRO_19250  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
NPRO_06030  acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
NPRO_04800  haloacid dehalogenase-like hydolase [KO:K20866] [EC:3.1.3.10]
NPRO_10910  phosphoenolpyruvate carboxykinase, ATP-utilizing [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
npy00020  Citrate cycle (TCA cycle)
npy00030  Pentose phosphate pathway
npy00500  Starch and sucrose metabolism
npy00620  Pyruvate metabolism
npy00640  Propanoate metabolism
npy00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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